DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL1 and mRpL1

DIOPT Version :10

Sequence 1:NP_524275.1 Gene:mRpL1 / 40980 FlyBaseID:FBgn0037566 Length:354 Species:Drosophila melanogaster
Sequence 2:XP_321348.4 Gene:mRpL1 / 1281437 VectorBaseID:AGAMI1_004175 Length:363 Species:Anopheles gambiae


Alignment Length:332 Identity:214/332 - (64%)
Similarity:270/332 - (81%) Gaps:5/332 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 RLLHLSAVSEAARKGTREKARKKKVKVEVKKVGFIPHNQRNK-KINVKRADKHVDDSWKQVPKDD 85
            ||||.:.:..||||||||||||.|||..|:|||||.|:.|.| |:|:..|:||:||||||.||||
Mosquito    23 RLLHTATLDLAARKGTREKARKAKVKKVVEKVGFIRHDLRKKGKLNLNVANKHIDDSWKQEPKDD 87

  Fly    86 CYVGRYYRWPVYSVQEAIQCHRETHHPSMYNVPNAPLNLDIELNMQAEKITRFVDNFQRMAMIPH 150
            |:|.:||:|.||:|:||||||||||||::||:|||||...:||||||||:||||||||||..|||
Mosquito    88 CWVSKYYKWRVYTVEEAIQCHRETHHPTVYNLPNAPLYAHVELNMQAEKVTRFVDNFQRMVAIPH 152

  Fly   151 KFDHGEERKIIVFTKGNNEVLEAREAGASLVGGVELIKDITSGELLLSDYQYVIAHPNILAELVA 215
            :|:|||.|.||||.||.:.:.||::|||:||||:||||:|.:|:|.||:|.:|:||||||.|||.
Mosquito   153 RFEHGENRNIIVFAKGQDPLKEAKDAGATLVGGMELIKEIQNGDLQLSEYPFVLAHPNILPELVV 217

  Fly   216 LRGLMKR-KFPNPKSETLGTNLAEMIVKFSSGISYSAAKDEYQQNFGLITASVGTLDMDVQKLEE 279
            :|||:|: |||||:|.|||.||||||.|::.||:|||||||.|::||.|.|.:|||.|:.:.||.
Mosquito   218 IRGLLKKNKFPNPRSGTLGVNLAEMIQKYAHGINYSAAKDEQQKDFGSIVACIGTLQMEAKHLES 282

  Fly   280 NIKFLLQDINTMRPKREGRFITRVLLKSPPSSEQLKIDPFVYVPE--MWDKSTAKVKRDGAKKQT 342
            |:..||||:|:|||||||||:||||||||||.|.|||:||:|:||  ::.|.:||. .|.|..:.
Mosquito   283 NLTALLQDVNSMRPKREGRFVTRVLLKSPPSGENLKINPFLYIPEEGVFSKRSAKT-TDAAASEE 346

  Fly   343 EPAEPQE 349
            |.||.:|
Mosquito   347 EDAEQEE 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL1NP_524275.1 rplA_mito 97..246 CDD:273480 102/149 (68%)
mRpL1XP_321348.4 None

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