DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ato and mespb

DIOPT Version :9

Sequence 1:NP_731223.1 Gene:ato / 40975 FlyBaseID:FBgn0010433 Length:312 Species:Drosophila melanogaster
Sequence 2:NP_001016653.1 Gene:mespb / 549407 XenbaseID:XB-GENE-970939 Length:292 Species:Xenopus tropicalis


Alignment Length:67 Identity:29/67 - (43%)
Similarity:44/67 - (65%) Gaps:2/67 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   243 RRGKQITPVVKRKRRLAANARERRRMQNLNQAFDRLRQYLP--CLGNDRQLSKHETLQMAQTYIS 305
            :|||:.|..:...:|.:|:.||:.||:||::|...||:|||  ....|:.|:|.||||:..:|||
 Frog    84 KRGKKNTGKLPYSQRQSASEREKLRMRNLSKALQNLRRYLPPSVAPLDKTLTKIETLQLTISYIS 148

  Fly   306 AL 307
            .|
 Frog   149 HL 150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atoNP_731223.1 HLH 253..312 CDD:238036 25/57 (44%)
mespbNP_001016653.1 HLH 97..150 CDD:278439 24/52 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.