DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ato and tcf15

DIOPT Version :9

Sequence 1:NP_731223.1 Gene:ato / 40975 FlyBaseID:FBgn0010433 Length:312 Species:Drosophila melanogaster
Sequence 2:NP_001016506.1 Gene:tcf15 / 549260 XenbaseID:XB-GENE-488935 Length:183 Species:Xenopus tropicalis


Alignment Length:107 Identity:45/107 - (42%)
Similarity:61/107 - (57%) Gaps:7/107 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   207 DLMLFSGGED--FDGNDGSFDLADGENQDAAAGGSGKKRRGKQITPVVKRKRRLAANARERRRMQ 269
            ||.:.|..|:  .|.:|.||.......:....||:|....|:   |||  |:|.|||||||.|.|
 Frog    17 DLSMLSEDEENQSDDSDQSFGCYQSSPKRRKVGGTGGTGGGQ---PVV--KQRQAANARERDRTQ 76

  Fly   270 NLNQAFDRLRQYLPCLGNDRQLSKHETLQMAQTYISALGDLL 311
            ::|.||..||..:|....||:|||.|.|::|.:|||.|.::|
 Frog    77 SVNTAFTALRTLIPTEPVDRKLSKIEILRLASSYISHLANVL 118

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atoNP_731223.1 HLH 253..312 CDD:238036 30/59 (51%)
tcf15NP_001016506.1 HLH 63..114 CDD:278439 27/50 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000894
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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