DRSC/TRiP Functional Genomics Resources

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Protein Alignment ato and Atoh8

DIOPT Version :9

Sequence 1:NP_731223.1 Gene:ato / 40975 FlyBaseID:FBgn0010433 Length:312 Species:Drosophila melanogaster
Sequence 2:NP_001102711.1 Gene:Atoh8 / 500200 RGDID:1561512 Length:322 Species:Rattus norvegicus


Alignment Length:213 Identity:49/213 - (23%)
Similarity:76/213 - (35%) Gaps:63/213 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 STAPAIPVASPPAVE---VMGSSNVGTCK-----------TIPASAGPKPKRSYTKKNQPSTTAT 167
            :..|.:|...||...   ..|...|...:           ..||...|....:.....|.|....
  Rat   118 TVGPGLPTPPPPPASQSLAPGDPEVQPLREQALRPRILLCAPPARPTPSAPLAPPAVPQESPVRP 182

  Fly   168 STPTAAAESSASVNLYTEEFQNFDFDNSALFDDSVEDDEDLMLFSGGEDFDGNDGSFDLADGENQ 232
            :.||...|||.|      ...:..::|                                    :.
  Rat   183 APPTRPGESSYS------SISHVIYNN------------------------------------HP 205

  Fly   233 DAAAGGSGKKRRGKQIT-----PVVKRKRRLAANARERRRMQNLNQAFDRLRQYLPCLGNDRQLS 292
            |::|  |.:||.|:...     ..:::.|||.||||||.|:..::.||:.||:.:||....::||
  Rat   206 DSSA--SPRKRPGEATAASTEIKALQQTRRLLANARERTRVHTISAAFEALRKQVPCYSYGQKLS 268

  Fly   293 KHETLQMAQTYISALGDL 310
            |...|::|..||.:|..|
  Rat   269 KLAILRIACNYILSLARL 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atoNP_731223.1 HLH 253..312 CDD:238036 25/58 (43%)
Atoh8NP_001102711.1 HLH 232..283 CDD:278439 23/50 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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