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Protein Alignment ato and Atoh1
DIOPT Version :9
Sequence 1: | NP_731223.1 |
Gene: | ato / 40975 |
FlyBaseID: | FBgn0010433 |
Length: | 312 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001102708.1 |
Gene: | Atoh1 / 500156 |
RGDID: | 1565171 |
Length: | 351 |
Species: | Rattus norvegicus |
Alignment Length: | 182 |
Identity: | 62/182 - (34%) |
Similarity: | 85/182 - (46%) |
Gaps: | 20/182 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 150 PKPKRSYTKKNQP----------ST--TATSTPTAAAESSASVNLYTEEFQNFDFDNSALFDDSV 202
|:|..:...::.| || .|..|||.....:|....|...........:|...|..
Rat 33 PQPPATLQARDHPVYPAELSLLDSTDPRAWLTPTLQGLCTARAAQYLLHSPELGASEAAAPGDEA 97
Fly 203 EDDEDLMLFSGGEDFDGNDGSF-------DLADGENQDAAAGGSGKKRRGKQITPVVKRKRRLAA 260
:...:|:..||......:.|.. .|..|...|.......:....||:.. |:::|||||
Rat 98 DGQGELVRRSGCGGLSKSPGPVKVREQLCKLKGGVVVDELGCSRQRAPSSKQVNG-VQKQRRLAA 161
Fly 261 NARERRRMQNLNQAFDRLRQYLPCLGNDRQLSKHETLQMAQTYISALGDLLR 312
||||||||..||.|||:||..:|...||::|||:|||||||.||:||.:||:
Rat 162 NARERRRMHGLNHAFDQLRNVIPSFNNDKKLSKYETLQMAQIYINALSELLQ 213
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
ato | NP_731223.1 |
HLH |
253..312 |
CDD:238036 |
38/58 (66%) |
Atoh1 | NP_001102708.1 |
HLH |
155..213 |
CDD:238036 |
38/57 (67%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C166339110 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG4395 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR19290 |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
5 | 4.840 |
|
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