DRSC/TRiP Functional Genomics Resources

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Protein Alignment ato and Neurod6

DIOPT Version :9

Sequence 1:NP_731223.1 Gene:ato / 40975 FlyBaseID:FBgn0010433 Length:312 Species:Drosophila melanogaster
Sequence 2:NP_001102707.1 Gene:Neurod6 / 500137 RGDID:1562793 Length:337 Species:Rattus norvegicus


Alignment Length:151 Identity:48/151 - (31%)
Similarity:73/151 - (48%) Gaps:35/151 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   192 FDNSALFDDS---------VEDDEDL---------MLFSG-------GEDFDGNDGSFDLADGEN 231
            ||.|.:..:|         .||.:.:         ::..|       ||:.:..:   :..|.|.
  Rat     6 FDESVVMPESQMCRKFARQCEDQKQIKKPESFPKQVVLRGKSIKRAPGEETEKEE---EEEDREE 67

  Fly   232 QDAAAGGSGKKR--RGKQITPVVKRK---RRLAANARERRRMQNLNQAFDRLRQYLPCLGNDRQL 291
            :|  ..|..::|  |.|:.|.:...:   ||..||||||.||..||.|.|.||:.:||....::|
  Rat    68 ED--ENGLPRRRGLRKKKTTKLRLERVKFRRQEANARERNRMHGLNDALDNLRKVVPCYSKTQKL 130

  Fly   292 SKHETLQMAQTYISALGDLLR 312
            ||.|||::|:.||.||.::||
  Rat   131 SKIETLRLAKNYIWALSEILR 151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atoNP_731223.1 HLH 253..312 CDD:238036 29/61 (48%)
Neurod6NP_001102707.1 HLH 100..151 CDD:197674 26/50 (52%)
Neuro_bHLH 153..272 CDD:315246
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166339087
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.840

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