DRSC/TRiP Functional Genomics Resources

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Protein Alignment ato and olig3

DIOPT Version :10

Sequence 1:NP_731223.1 Gene:ato / 40975 FlyBaseID:FBgn0010433 Length:312 Species:Drosophila melanogaster
Sequence 2:NP_001008191.1 Gene:olig3 / 493553 XenbaseID:XB-GENE-919789 Length:263 Species:Xenopus tropicalis


Alignment Length:152 Identity:47/152 - (30%)
Similarity:71/152 - (46%) Gaps:21/152 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 TSTPTAAAESSASVNLYTEEFQNFDFDNSALFDDSVEDDEDLMLFSGGEDFDGNDGSFDLADGEN 231
            :|:.::.|.|....::|.......|...|     ||...::.||....|:.....||    .|| 
 Frog     5 SSSMSSRASSPDMEDMYLRSHHRPDNRMS-----SVSSTQNDMLQKMSEEMLSKHGS----RGE- 59

  Fly   232 QDAAAGGSGKKRRGKQITPVVKRKRRLAANARERRRMQNLNQAFDRLRQYLPCLGND--RQLSKH 294
                 |.|.|.:..||::....::.||..|.|||:||.:||.|.|.||:.:|.....  |:|||.
 Frog    60 -----GESSKYKIKKQLSEQDLQQLRLKINGRERKRMHDLNLAMDGLREVMPYAHGPSVRKLSKI 119

  Fly   295 ETLQMAQTYI----SALGDLLR 312
            .||.:|:.||    |:|.::.|
 Frog   120 ATLLLARNYILMLTSSLEEMKR 141

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atoNP_731223.1 bHLH_TS_amos_like 250..311 CDD:381558 26/66 (39%)
olig3NP_001008191.1 bHLH_SF 64..144 CDD:469605 30/78 (38%)

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