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Protein Alignment ato and olig3
DIOPT Version :9
Sequence 1: | NP_731223.1 |
Gene: | ato / 40975 |
FlyBaseID: | FBgn0010433 |
Length: | 312 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001008191.1 |
Gene: | olig3 / 493553 |
XenbaseID: | XB-GENE-919789 |
Length: | 263 |
Species: | Xenopus tropicalis |
Alignment Length: | 152 |
Identity: | 47/152 - (30%) |
Similarity: | 71/152 - (46%) |
Gaps: | 21/152 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 167 TSTPTAAAESSASVNLYTEEFQNFDFDNSALFDDSVEDDEDLMLFSGGEDFDGNDGSFDLADGEN 231
:|:.::.|.|....::|.......|...| ||...::.||....|:.....|| .||
Frog 5 SSSMSSRASSPDMEDMYLRSHHRPDNRMS-----SVSSTQNDMLQKMSEEMLSKHGS----RGE- 59
Fly 232 QDAAAGGSGKKRRGKQITPVVKRKRRLAANARERRRMQNLNQAFDRLRQYLPCLGND--RQLSKH 294
|.|.|.:..||::....::.||..|.|||:||.:||.|.|.||:.:|..... |:|||.
Frog 60 -----GESSKYKIKKQLSEQDLQQLRLKINGRERKRMHDLNLAMDGLREVMPYAHGPSVRKLSKI 119
Fly 295 ETLQMAQTYI----SALGDLLR 312
.||.:|:.|| |:|.::.|
Frog 120 ATLLLARNYILMLTSSLEEMKR 141
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
ato | NP_731223.1 |
HLH |
253..312 |
CDD:238036 |
26/64 (41%) |
olig3 | NP_001008191.1 |
bHLH_SF |
64..144 |
CDD:381792 |
30/78 (38%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
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