DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ato and olig2

DIOPT Version :9

Sequence 1:NP_731223.1 Gene:ato / 40975 FlyBaseID:FBgn0010433 Length:312 Species:Drosophila melanogaster
Sequence 2:NP_835201.1 Gene:olig2 / 325288 ZFINID:ZDB-GENE-030131-4013 Length:273 Species:Danio rerio


Alignment Length:139 Identity:42/139 - (30%)
Similarity:63/139 - (45%) Gaps:18/139 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   191 DFDNSALFD-DSVEDDEDLML--------FSGGEDFDGNDGSFDLADGE-------NQDAAAGGS 239
            |.|.|.:.. .|..:.:||.|        |||......:|...:|...:       .:|:.|...
Zfish     2 DSDTSRVSSRPSSPEGDDLFLSAVKKSVGFSGAVSSTQSDSPPELRGADMRGISSAEEDSMALKM 66

  Fly   240 GKKRRGKQITPVVKRKRRLAANARERRRMQNLNQAFDRLRQYLPCLGND--RQLSKHETLQMAQT 302
            ..|:..|.::....:..||..|:|||:||.:||.|.|.||:.:|.....  |:|||..||.:|:.
Zfish    67 LSKKDRKLLSENELQSMRLKINSRERKRMHDLNIAMDGLREVMPYAHGPSVRKLSKIATLLLARN 131

  Fly   303 YISALGDLL 311
            ||..|.:.|
Zfish   132 YILMLSNSL 140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atoNP_731223.1 HLH 253..312 CDD:238036 26/61 (43%)
olig2NP_835201.1 HLH 88..142 CDD:197674 24/53 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578667
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.