DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ato and olig4

DIOPT Version :9

Sequence 1:NP_731223.1 Gene:ato / 40975 FlyBaseID:FBgn0010433 Length:312 Species:Drosophila melanogaster
Sequence 2:NP_955808.1 Gene:olig4 / 324857 ZFINID:ZDB-GENE-030131-3580 Length:244 Species:Danio rerio


Alignment Length:123 Identity:41/123 - (33%)
Similarity:57/123 - (46%) Gaps:7/123 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   193 DNSALFDDSVEDDEDLMLFSGGEDFDGNDGSFDLADGENQDAAAG--GSGKKRRGKQITPVVKRK 255
            |:.|....|.....||.:.||   |..|.......:...|.:..|  .:||.|....::....:.
Zfish     2 DSDASSTCSRSSSPDLTVDSG---FFSNKMFQAYGETVQQKSEKGLQNAGKTRTRADLSKDDLQD 63

  Fly   256 RRLAANARERRRMQNLNQAFDRLRQYLPCLGND--RQLSKHETLQMAQTYISALGDLL 311
            .||..|:|||:||.:||||.|.||:.:|.....  |:|||..||.:|:.||..|...|
Zfish    64 LRLKVNSRERKRMHDLNQAMDGLREVMPYAQGPSVRKLSKISTLLLARNYILMLSSSL 121

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atoNP_731223.1 HLH 253..312 CDD:238036 27/61 (44%)
olig4NP_955808.1 HLH 69..123 CDD:197674 25/53 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578683
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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