DRSC/TRiP Functional Genomics Resources

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Protein Alignment ato and tcf3a

DIOPT Version :9

Sequence 1:NP_731223.1 Gene:ato / 40975 FlyBaseID:FBgn0010433 Length:312 Species:Drosophila melanogaster
Sequence 2:NP_571169.1 Gene:tcf3a / 30310 ZFINID:ZDB-GENE-990415-51 Length:583 Species:Danio rerio


Alignment Length:342 Identity:81/342 - (23%)
Similarity:130/342 - (38%) Gaps:85/342 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 TSEDLQGFKTAAAEPYFNPMAAYNPGVTHYQFNGNTLAS-------SSNYLSAN----GFISFEQ 66
            :||.:.|.:.|            |.|.:..:. |..|||       .||:.|..    |..|...
Zfish   248 SSEGIMGNRGA------------NAGSSGAEI-GKALASIYPSDNNGSNFSSTPSTPVGSPSNVA 299

  Fly    67 ASSDGWI--SSSPASHRSESPEY------VDLNTMYNGGCNNMAQNQQYGMIMEQSVVSTAPAIP 123
            ||:..|.  ||.||    .||.:      ..|:.......:.:..:...|..| ||::|.|.:..
Zfish   300 ASASQWPKGSSQPA----PSPGFEAGLAQSKLDDRLGEALHVLRNHHAVGTDM-QSLLSAAISGH 359

  Fly   124 VASPPAV----EVMGSSN--VGTCKTIPASAGPKPKRS------YTKKNQP----STTATSTPTA 172
            .|...|:    :..|.:|  .|........|...|:.|      :|....|    |.|.||...|
Zfish   360 SAGAAALGSLRQAFGLANRLPGLMSNHSEDAAGLPQSSALLQGHHTSHQPPPSSQSDTFTSLSLA 424

  Fly   173 AAESSASVNLYTEEFQNFDFDNSALFDDSVEDDEDLMLFSGGEDFDGNDGSFDLADGENQDAAAG 237
            .:..::|.::..|:               .:|||:|.:....||        :..||:::...:.
Zfish   425 RSSHASSSDIKRED---------------KDDDENLSIADKSED--------EKKDGKSRTRTSQ 466

  Fly   238 GSGKKRRGKQITPVVK----RKRRLAANARERRRMQNLNQAFDRLRQYLPC---LGNDRQLSKHE 295
            ...:....:.:...||    |:||:|.|||||.|::::|:||..|.:.  |   |.|::..:|..
Zfish   467 DEDEDEDDEDLPVEVKAERERERRMANNARERLRVRDINEAFKELGRM--CQLHLSNEKPQTKLL 529

  Fly   296 TLQMAQTYISALGDLLR 312
            .|..|...|..|...:|
Zfish   530 ILHQAVNVILNLEQQVR 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atoNP_731223.1 HLH 253..312 CDD:238036 23/65 (35%)
tcf3aNP_571169.1 HLH 494..547 CDD:197674 19/55 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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