DRSC/TRiP Functional Genomics Resources

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Protein Alignment ato and hnd-1

DIOPT Version :9

Sequence 1:NP_731223.1 Gene:ato / 40975 FlyBaseID:FBgn0010433 Length:312 Species:Drosophila melanogaster
Sequence 2:NP_509952.1 Gene:hnd-1 / 183457 WormBaseID:WBGene00001981 Length:226 Species:Caenorhabditis elegans


Alignment Length:61 Identity:23/61 - (37%)
Similarity:38/61 - (62%) Gaps:2/61 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   253 KRKRRLAANARERRRMQNLNQAFDRLRQYLPCLGND--RQLSKHETLQMAQTYISALGDLL 311
            |:.|:..:..:|.||.|.:|.||:.|:|::|.|.::  :.|.|.:||::|..||..|..||
 Worm    21 KKSRKEKSREKEHRRAQCINSAFEILQQHIPYLKSEERKSLPKIKTLRLAMQYIDHLKKLL 81

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atoNP_731223.1 HLH 253..312 CDD:238036 23/61 (38%)
hnd-1NP_509952.1 bHLH_TS_ASCL 24..81 CDD:381424 20/56 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000894
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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