DRSC/TRiP Functional Genomics Resources

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Protein Alignment ato and neurog3

DIOPT Version :9

Sequence 1:NP_731223.1 Gene:ato / 40975 FlyBaseID:FBgn0010433 Length:312 Species:Drosophila melanogaster
Sequence 2:XP_002935814.2 Gene:neurog3 / 100038294 XenbaseID:XB-GENE-876279 Length:226 Species:Xenopus tropicalis


Alignment Length:107 Identity:43/107 - (40%)
Similarity:57/107 - (53%) Gaps:15/107 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   221 DGSFDLADGENQDAAAGGS---GKKRRGKQI----------TPVVK--RKRRLAANARERRRMQN 270
            |....||:.|:.....|.|   |.:|:.:::          |.|:|  |.||:.||.|||.||.|
 Frog    37 DSQLSLAESEDCTLVDGYSHPRGNERKKQKVKRMRSKVKSNTTVIKQRRNRRVKANDRERNRMHN 101

  Fly   271 LNQAFDRLRQYLPCLGNDRQLSKHETLQMAQTYISALGDLLR 312
            ||.|.|.||..||...:|.:|:|.|||:.|..||.||.:.||
 Frog   102 LNSALDALRSVLPTFPDDAKLTKIETLRFAHNYIWALSETLR 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atoNP_731223.1 HLH 253..312 CDD:238036 31/60 (52%)
neurog3XP_002935814.2 bHLH_TS_NGN3_ATOH5 80..147 CDD:381561 34/64 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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