DRSC/TRiP Functional Genomics Resources

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Protein Alignment ato and neurod1

DIOPT Version :9

Sequence 1:NP_731223.1 Gene:ato / 40975 FlyBaseID:FBgn0010433 Length:312 Species:Drosophila melanogaster
Sequence 2:NP_001090868.1 Gene:neurod1 / 100038290 XenbaseID:XB-GENE-963757 Length:361 Species:Xenopus tropicalis


Alignment Length:124 Identity:49/124 - (39%)
Similarity:67/124 - (54%) Gaps:11/124 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   200 DSV--EDDEDLMLFSGGEDFDGNDGSFDLA---DGENQDAAAGGSGKKRRGKQITPVVKRK---- 255
            ||:  |||||.:....||:.:..|...|..   |.:..|........||||.:...:.|.:    
 Frog    42 DSLMKEDDEDSLNHHNGEENEEEDEVDDEEEEDDDDEDDEDDDDQKPKRRGPKKKKMTKARVERF 106

  Fly   256 --RRLAANARERRRMQNLNQAFDRLRQYLPCLGNDRQLSKHETLQMAQTYISALGDLLR 312
              ||:.||||||.||..||.|.|.||:.:||....::|||.|||::|:.||.||.::||
 Frog   107 KVRRMKANARERNRMHGLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILR 165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atoNP_731223.1 HLH 253..312 CDD:238036 30/64 (47%)
neurod1NP_001090868.1 bHLH_TS_NeuroD1 82..167 CDD:381562 36/84 (43%)
Neuro_bHLH 167..288 CDD:372170
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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