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Protein Alignment ato and olig1
DIOPT Version :9
Sequence 1: | NP_731223.1 |
Gene: | ato / 40975 |
FlyBaseID: | FBgn0010433 |
Length: | 312 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001018632.1 |
Gene: | olig1 / 100001484 |
ZFINID: | ZDB-GENE-050107-2 |
Length: | 235 |
Species: | Danio rerio |
Alignment Length: | 107 |
Identity: | 31/107 - (28%) |
Similarity: | 49/107 - (45%) |
Gaps: | 25/107 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 229 GENQDAAAGGSGKKRRGKQITPVVKRKRRLAANARERRRMQNLNQAFDRLRQYL----------- 282
|.|..:..|.....:..::::...:::.|...|:|||:|||:||.|.|.||:.:
Zfish 34 GSNVGSLQGPLRSSKPPRELSSEEQQELRRKINSRERKRMQDLNVAMDALREVMVPYSSSPTGVG 98
Fly 283 ------------PCLGNDRQLSKHETLQMAQTYISALGDLLR 312
|..| |:|||..||.:|:.||..||..|:
Zfish 99 GALQHPYFPPGAPTTG--RRLSKISTLVLARNYILLLGSSLQ 138
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
ato | NP_731223.1 |
HLH |
253..312 |
CDD:238036 |
27/81 (33%) |
olig1 | NP_001018632.1 |
HLH domain |
62..139 |
|
28/79 (35%) |
HLH |
62..133 |
CDD:278439 |
25/72 (35%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C170578677 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.840 |
|
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