Protein Alignment CG9630 and RRP3

DIOPT Version :10

• Sequence 1: NP_649777.1
• Gene: CG9630 / 40974
• FlyBaseID: FBgn0037561
• Length: 613
• Species: Drosophila melanogaster
• Sequence 2: NP_011932.2
• Gene: RRP3 / 856462
• SGDID: S000001107
• Length: 501
• Species: Saccharomyces cerevisiae
• Alignment Length: 489
• Identity: 162/489 - (33%)
• Similarity: 244/489 - (49%)
• Gaps: 99/489 - (20%)

  Fly     2 SRKKWSSLDKPPLSDAVLQVVQSFGFQQMTPVQTAAIPLLLARKDVSAEAVTGSGKTLAFLVPML 66
            |.:.:|.|:..|   .::|..::..:.:.||:|:.|||..|...|:...|.||||||.||.:|:|
Yeast    79 SFESFSELNLVP---ELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFAIPIL 140

  Fly    67 EILQRRHKETPWGPKEIGALVISPTRELARQISEVLAQFLEHEDLEHLNQQLIVGGNSIEEDIAT 131
            ..|.  |.:.|:     .|.:::||||||:||.|.   |.....|..:....||||.::.:....
Yeast   141 NRLW--HDQEPY-----YACILAPTRELAQQIKET---FDSLGSLMGVRSTCIVGGMNMMDQARD 195

  Fly   132 LRRETPCILVCTPGRLED-LFQRKGDDLNLAAQVKSLEFLVLDEADRLLDLGFKTSVNNILGYLP 195
            |.|: |.|::.|||||.| |...||..|      :.|:|||:||||||||:.|...::.||..:|
Yeast   196 LMRK-PHIIIATPGRLMDHLENTKGFSL------RKLKFLVMDEADRLLDMEFGPVLDRILKIIP 253

  Fly   196 RQRRTG-LFSATQTTEVTDLIRAGLRNPVLVSVKEK-ASVNT--------PARLQNFYRIVEPEL 250
            .|.||. |||||.|:::..|.||.|.|||..:|..| .:|:|        |..|:|.|.|
Yeast   254 TQERTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLMVVPGGLKNTYLI----- 313

  Fly   251 KFVALLEFLSSPATVIGKVMVFFP-----------TCACVEYWAEALPPLLPKRTVLGIHGKM-K 303
              ..|.||       |||.|:.|.           .|..:|:.|.||            ||.: :
Yeast   314 --YLLNEF-------IGKTMIIFTRTKANAERLSGLCNLLEFSATAL------------HGDLNQ 357

  Fly   304 NKRANVVEKFRNTPQAVLLCTDVLARGLDVPEIEWVVQWDPPSTASSFVHRVGRTARQGNEGNAL 368
            |:|...::.|:...:::|:.|||.|||||:|.::.||.:|.|..:.|::||||||||.|..|.:
Yeast   358 NQRMGSLDLFKAGKRSILVATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVGRTARAGRSGKS- 421

  Fly   369 VFLLPSEDAYVHFLKINQKVE--LTKLLTEEAED-------ADREKKKLPAVLDQLHRLQAADKG 424
            :.|:...|     |::..::|  |.|.|.:|:.|       .|...|....|:.:::| :..:|.
Yeast   422 ISLVSQYD-----LELILRIEEVLGKKLPKESVDKNIILTLRDSVDKANGEVVMEMNR-RNKEKI 480

  Fly   425 VYDKGMRAFVSHVRAYTKHECSAILRLKDLDLGK 458
            ...||.|.     |..|:         :::|:|:
Yeast   481 ARGKGRRG-----RMMTR---------ENMDMGE 500

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG9630	NP_649777.1	DEADc_DDX55	18..226	CDD:350718	85/209 (41%)
		SF2_C_DEAD	239..371	CDD:350174	47/143 (33%)
		DUF4217	414..470	CDD:464056	9/45 (20%)
RRP3	NP_011932.2	SrmB	82..489	CDD:440279	157/464 (34%)