DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9630 and SPB4

DIOPT Version :9

Sequence 1:NP_649777.1 Gene:CG9630 / 40974 FlyBaseID:FBgn0037561 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_116654.1 Gene:SPB4 / 850549 SGDID:S000001894 Length:606 Species:Saccharomyces cerevisiae


Alignment Length:647 Identity:217/647 - (33%)
Similarity:342/647 - (52%) Gaps:87/647 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SLDKPPLSDAVLQVVQS----FGFQQMTPVQTAAIPLLLARKDVSAEAVTGSGKTLAFLVPMLE- 67
            ||:...|..::|..:::    .||:.|||||.:.||:|...|||..::|||||||.||::|:|| 
Yeast     4 SLEWDNLGFSLLPWIRTGLDVMGFETMTPVQASTIPMLAGNKDVVVDSVTGSGKTAAFVIPVLEK 68

  Fly    68 ILQRRHKETPWGPKEIGALVISPTRELARQISEVLAQFLEH--EDLEHLNQQLIVGGN--SIEED 128
            :::.....:.:......:|:|:|||||:|||..|:..||||  .||..:..||:||.|  ::.:|
Yeast    69 VVKEEANTSKFKKAHFHSLIIAPTRELSRQIESVVLSFLEHYPSDLFPIKCQLLVGTNEATVRDD 133

  Fly   129 IATLRRETPCILVCTPGRLEDLFQRKGDDLNLAAQVKSLEFLVLDEADRLLDLGFKTSVNNILGY 193
            ::...|..|.||:.||||:.|..|..      |.:..:...:|:||||||||:.|......||..
Yeast   134 VSNFLRNRPQILIGTPGRVLDFLQMP------AVKTSACSMVVMDEADRLLDMSFIKDTEKILRL 192

  Fly   194 LPRQRRTGLFSATQTTEVTDLIRAGLRNPVLVSVKEKASVNTPARLQNFYRIVEPELKFVALLEF 258
            ||:||||||||||..:..:|:.:.||||||.::|..|.  ..|:.|:..|.:|.|..|...|:..
Yeast   193 LPKQRRTGLFSATMRSAGSDIFKTGLRNPVRITVNSKN--QAPSSLKLNYCVVNPAEKLQLLVSI 255

  Fly   259 LSSPATVIGKVMVFFPTCACVEYWAEALPPLLPKRTVL-------GIHGKMK-NKRANVVEKFRN 315
            |::  ....|.:|:||||..|.|:...: ..|.||.:|       .:|||:: :.|...:..|.:
Yeast   256 LNN--YKFKKCIVYFPTCVSVSYFYSFI-QYLGKRNILVNEVEIFSLHGKLQTSARTKTLTAFTD 317

  Fly   316 T-PQAVLLCTDVLARGLDVPEIEWVVQWDPPSTASSFVHRVGRTARQGNEGNALVFLLPS-EDAY 378
            : ..:||..|||.|||:|:|:::.|:|.|||:....|:||.|||.|....|.|:.||... |:.:
Yeast   318 SLSNSVLFTTDVAARGIDIPDVDLVIQLDPPTNTDMFMHRCGRTGRANRVGKAITFLNEGREEDF 382

  Fly   379 VHFLKINQKVELTKLLTEEAEDADREKKKLPA-VLDQLHRLQAADKGVYDKGMRAFVSHVRAYTK 442
            :.|::: :.|||        |:.|.|.|.:.. ..:........|:..:|||::|:|:.::.|:.
Yeast   383 IPFMQV-KNVEL--------EELDLEVKGITTNFYEDFRNWILEDRDRFDKGVKAYVAFIKYYSN 438

  Fly   443 HECSAILRLKDLDLGKMATAYGLLQLPRMPELKNY----------QGGGYVAPAFEVDLSKLTYK 497
            |..::|.||:.||...:|..|||.:||||||:..|          .|...|.|  .|::.:..||
Yeast   439 HSATSIFRLQSLDYVGIAKLYGLFRLPRMPEITKYLATEKQEGIFPGNWLVDP--PVNMDEYKYK 501

  Fly   498 NAQKEQVRQKKMETYEQTGSWPGQKQH-KKRVESWDQ---TKKAKLDAKSKKELRKAKKQRKKAA 558
            :.::|:.||:.::...........|.. ||:..:|..   ||:.||:.|.|..|      ::||.
Yeast   502 DKKREKERQETLKNISLINDKKKLKSELKKKNLAWSDKTLTKERKLERKEKMSL------KRKAI 560

  Fly   559 EAEASRSGKGKKRQQFSQEDLDELASDIRL---FKRL----KKNKISEEDFDKAMGIEGNND 613
            |            ::...|:|||.|.:.|:   :|.:    |:.|:|.:      .|:||.|
Yeast   561 E------------EELKAEELDENAEEERIKEDWKEIVLQNKRKKVSSK------AIQGNFD 604

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9630NP_649777.1 DEADc 6..226 CDD:238167 94/226 (42%)
DEXDc 22..232 CDD:214692 92/218 (42%)
HELICc 239..370 CDD:238034 48/139 (35%)
DUF4217 411..470 CDD:290667 18/58 (31%)
SPB4NP_116654.1 SrmB 1..>383 CDD:223587 148/389 (38%)
DUF4217 409..466 CDD:404785 18/56 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345857
Domainoid 1 1.000 141 1.000 Domainoid score I1016
eggNOG 1 0.900 - - E2759_KOG0345
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H12196
Inparanoid 1 1.050 307 1.000 Inparanoid score I484
Isobase 1 0.950 - 0 Normalized mean entropy S1206
OMA 1 1.010 - - QHG53613
OrthoFinder 1 1.000 - - FOG0003582
OrthoInspector 1 1.000 - - oto100053
orthoMCL 1 0.900 - - OOG6_102339
Panther 1 1.100 - - LDO PTHR24031
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1376
SonicParanoid 1 1.000 - - X2452
TreeFam 1 0.960 - -
1615.740

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