DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9630 and AT3G18600

DIOPT Version :9

Sequence 1:NP_649777.1 Gene:CG9630 / 40974 FlyBaseID:FBgn0037561 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_188490.1 Gene:AT3G18600 / 821391 AraportID:AT3G18600 Length:568 Species:Arabidopsis thaliana


Alignment Length:509 Identity:177/509 - (34%)
Similarity:268/509 - (52%) Gaps:48/509 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSRKKWSSLDKPPLSDAVLQVVQSFGFQQMTPVQTAAIPLLLARKDVSAEAVTGSGKTLAFLVPM 65
            |:...:.|||   ||:.....::..|||.||.:|..:|..||..|||...|.||||||||||:|.
plant    86 MTNVTFDSLD---LSEQTSIAIKEMGFQYMTQIQAGSIQPLLEGKDVLGAARTGSGKTLAFLIPA 147

  Fly    66 LEILQRRHKETPWGPKE-IGALVISPTRELARQISEVLAQFLEHEDLEHLNQQLIVGGNSIEEDI 129
            :|:|.:..    :.|:. .|.:||.||||||.|...|..:.|:|..   ....:::|||:...:.
plant   148 VELLFKER----FSPRNGTGVIVICPTRELAIQTKNVAEELLKHHS---QTVSMVIGGNNRRSEA 205

  Fly   130 ATLRRETPCILVCTPGRLEDLFQRKGDDLNLAAQV-KSLEFLVLDEADRLLDLGFKTSVNNILGY 193
            ..:...:. :::.|||||.|..|      |..|.: |.|:.||:|||||:|:..|:..:|.||..
plant   206 QRIASGSN-LVIATPGRLLDHLQ------NTKAFIYKHLKCLVIDEADRILEENFEEDMNKILKI 263

  Fly   194 LPRQRRTGLFSATQTTEVTDLIRAGLRNPVLVSVKEKASVNTPARLQNFYRIVEPELKFVALLEF 258
            ||:.|:|.|||||||::|.||.|..|.:||.|.|.:.....|...|:..|.:|..:.:.:.|:.|
plant   264 LPKTRQTALFSATQTSKVKDLARVSLTSPVHVDVDDGRRKVTNEGLEQGYCVVPSKQRLILLISF 328

  Fly   259 LSSPATVIGKVMVFFPTCACVEYWAEALPPLLPKRTVLGIHGKM-KNKRANVVEKFRNTPQAVLL 322
            |..  .:..|:||||.||..|::..|.:.  :....|..|||.| :|:|......|....:.:||
plant   329 LKK--NLNKKIMVFFSTCKSVQFHTEIMK--ISDVDVSDIHGGMDQNRRTKTFFDFMKAKKGILL 389

  Fly   323 CTDVLARGLDVPEIEWVVQWDPPSTASSFVHRVGRTAR-QGNEGNALVFLLPSEDAYVHFLKINQ 386
            ||||.|||||:|.::|::|:|||...:.::|||||||| :|.:|.||:.|:|.|..::.:||. .
plant   390 CTDVAARGLDIPSVDWIIQYDPPDKPTEYIHRVGRTARGEGAKGKALLVLIPEELQFIRYLKA-A 453

  Fly   387 KVELTKLLTEEAEDADREKKKLPAVLDQLHRLQAADKGVYDKGMRAFVSHVRAYTKHECSAILRL 451
            ||.:.:|        :..:|:|..|...|.:..|.|..:......|:.:::.||..|....|..:
plant   454 KVPVKEL--------EFNEKRLSNVQSALEKCVAKDYNLNKLAKDAYRAYLSAYNSHSLKDIFNV 510

  Fly   452 KDLDLGKMATAYGLLQLPRMPELKNYQGGGYVAPAFEVDLSKLTYKNAQKEQVR 505
            ..|||..:|.::.....|:: .|....|.|.|             :.|:|:|.|
plant   511 HRLDLLAVAESFCFSSPPKV-NLNIESGAGKV-------------RKARKQQGR 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9630NP_649777.1 DEADc 6..226 CDD:238167 89/221 (40%)
DEXDc 22..232 CDD:214692 86/211 (41%)
HELICc 239..370 CDD:238034 52/132 (39%)
DUF4217 411..470 CDD:290667 13/58 (22%)
AT3G18600NP_188490.1 SrmB 86..553 CDD:223587 177/509 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D973872at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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