DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9630 and ddx10

DIOPT Version :9

Sequence 1:NP_649777.1 Gene:CG9630 / 40974 FlyBaseID:FBgn0037561 Length:613 Species:Drosophila melanogaster
Sequence 2:XP_001922220.1 Gene:ddx10 / 569118 ZFINID:ZDB-GENE-071022-2 Length:864 Species:Danio rerio


Alignment Length:672 Identity:214/672 - (31%)
Similarity:316/672 - (47%) Gaps:115/672 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 PLSDAVLQVVQSFGFQQMTPVQTAAIPLLLARKDVSAEAVTGSGKTLAFLVPMLEILQRRHKETP 77
            |||...|:.:....::|.|.:|...|...|..:||...|.||||||||||:|:||.|.|..    
Zfish    76 PLSKKTLKGLLEAQYRQPTEIQRQTIGFALQGRDVLGAAKTGSGKTLAFLIPVLECLYREQ---- 136

  Fly    78 WGPKE-IGALVISPTRELARQISEVLAQF-LEHEDLEHLNQQLIVGGNSIEEDIATLRRETPCIL 140
            |...: :|||:||||||||.|..|||.:. ..||    .:..|::||..::::...:.|..  |:
Zfish   137 WTAMDGLGALIISPTRELAYQTFEVLRKVGKNHE----FSAGLVIGGKDLKDESEKIHRTN--II 195

  Fly   141 VCTPGRLEDLFQRKGDDLNLAAQVKSLEFLVLDEADRLLDLGFKTSVNNILGYLPRQRRTGLFSA 205
            :|||||   |.|...:.....|  ..|..||||||||:||:||..::|.|:..||:.|:|.||||
Zfish   196 ICTPGR---LLQHMDETATFHA--SDLHMLVLDEADRILDMGFADTLNAIVENLPKSRQTLLFSA 255

  Fly   206 TQTTEVTDLIRAGLRNPVLVSVKEKASVNTPARLQNFYRIVEPELKFVALLEFLSSPATVIGKVM 270
            |||..|.||.|..|::|..|.|.|:|..:|||.|:..|.:.|...|...|..||.|  .:..|::
Zfish   256 TQTRSVKDLARLSLKDPEYVW
VHEQAKFSTPATLEQNYVVCELHQKVNMLYSFLRS--HLQKKII 318

  Fly   271 VFFPTCACVEYWAEALPPLLPKRTVLGIHGKMKN-KRANVVEKFRNTPQAVLLCTDVLARGLDVP 334
            |||..|..|:|.......|.|..:||.:|||.:. ||..|...|.....|||..||:.|||||.|
Zfish   319 VFFACCKEVQYLFRIFCRLRPGISVLALHGKQQQMKRVEVYNDFVRKTSAVLFATDIAARGLDFP 383

  Fly   335 EIEWVVQWDPPSTASSFVHRVGRTARQGNEGNALVFLLPSEDAYVHFLKINQKVELTKLLTEEAE 399
            .:.||:|:|.|..|::::||||||||....|.||:.|||||:..:......:||.:.|:..    
Zfish   384 AVNWVLQFDCPEDANTYIHRVGRTARYKEGGEALLVLLPSEEKGMISQLQEKKVPINKIQV---- 444

  Fly   400 DADREKKKLPAVLDQLHRLQAADKGVYDKGMRAFVSHVRAYTKHECSAILRLKDLDLGKMATAYG 464
                ..:||.:|..:|....|.:|...::..|.|||::|:....:...:..:..|.|.:.|.:.|
Zfish   445 ----NPEKLMSVQQKLEAFLAQEKEQKERAQRCFVSYLRSVYLMKNKDVFDVLQLKLPEYAMSLG 505

  Fly   465 LLQLPRMPELKNYQGGGYVAPAFEVDLSKLTYKNAQK-----EQVRQKKMETYEQTGSWPGQKQH 524
            |...||:..|...|.....|.  :.|.|...:::..:     .|::|:|      |.|.|.|.:.
Zfish   506 LAVAPRVRFLLKAQQQRRTAA--QDDSSTAGHQSEDELQSFTAQLQQQK------TKSEPSQSEE 562

  Fly   525 K--------------KRVESWDQTKKAKL------------------------------------ 539
            :              :.::..|..|...|                                    
Zfish   563 EEDDDDDDDEGDDDDEDIKDQDSLKPLSLLCGFNEEDDDDDQREADLLTVKCKDVFNVKEEIKDE 627

  Fly   540 -----DAKSKKE----LRKAKKQRKKAAEAEASR--SGKGKKRQQF---------SQEDLDELAS 584
                 |||::|:    .:.|||.:|:..:....:  :..||..||:         .:||.|::.:
Zfish   628 EDADADAKNRKQKESKFKDAKKIQKRNLKVNTKKVFTEDGKVVQQWPPLQRTVVPDEEDDDDVMT 692

  Fly   585 DIRLFKRLKKNKISEED--FDK 604
            .|.:  ...|.::..||  |||
Zfish   693 GINV--EAAKERLRREDQAFDK 712

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9630NP_649777.1 DEADc 6..226 CDD:238167 90/214 (42%)
DEXDc 22..232 CDD:214692 89/211 (42%)
HELICc 239..370 CDD:238034 54/131 (41%)
DUF4217 411..470 CDD:290667 14/58 (24%)
ddx10XP_001922220.1 DEADc 72..276 CDD:238167 90/214 (42%)
DEXDc 90..275 CDD:214692 86/199 (43%)
HELICc 289..419 CDD:238034 54/131 (41%)
DUF4217 452..511 CDD:290667 14/58 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D973872at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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