DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9630 and Rs1

DIOPT Version :9

Sequence 1:NP_649777.1 Gene:CG9630 / 40974 FlyBaseID:FBgn0037561 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_001286188.1 Gene:Rs1 / 44087 FlyBaseID:FBgn0021995 Length:782 Species:Drosophila melanogaster


Alignment Length:663 Identity:188/663 - (28%)
Similarity:284/663 - (42%) Gaps:120/663 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LSDAVLQVVQSFGFQQMTPVQTAAIPLLLARKDVSAEAVTGSGKTLAFLVPMLEILQRRHKETPW 78
            ||..:::.:...|:...||:|.:.||:.|..:|:...|.||:|||.|:::|.||.|..|    |.
  Fly   164 LSRPLMRAIGVLGYIYPTPIQASTIPVALLGRDICGCAATGTGKTAAYMLPTLERLLYR----PL 224

  Fly    79 GPKEI-GALVISPTRELARQISEVLAQFLEHEDLEHLNQQLIVGGNSIEEDIATLRRETPCILVC 142
            ..|.| ..||:.|||||..|:.:|..|..:...::   ..|.:||..::...|.| |:.|.|::.
  Fly   225 NNKAITRVLVLVPTRELGAQVYQVTKQLCQFTTID---VGLAIGGLDVKAQEAVL-RQNPDIVIA 285

  Fly   143 TPGRLEDLFQRKGDDLNLAAQVKSLEFLVLDEADRLLDLGFKTSVNNILGYLPRQRRTGLFSATQ 207
            |||||.|..:.     ..:..:.|:|.|:||||||:||..|...:..|:....:.|:|.|||||.
  Fly   286 TPGRLIDHIKN-----TPSFTLDSIEVLILDEADRMLDEYFAEQMKEIINSCCKTRQTMLFSATM 345

  Fly   208 TTEVTDLIRAGLRNPVLVSVKEKASVNTPARLQNFYRIVEPELKFVALLEFLSSP--ATVIGKV- 269
            :.:|.||....|..|:.|.|.....|....| |.|.||.|.:       |....|  |::|.:. 
  Fly   346 SEQVKDLAAVSLDKPIKVFVNNNQQVAFNLR-QEFIRIREDK-------EGDREPILASLICRTF 402

  Fly   270 ----MVFFPTCACVEYWAEALPPLLPKRTVLGI-----HGKM-KNKRANVVEKFRNTPQAVLLCT 324
                |||..|    :..|..|..||   .:||:     ||.: :.:|...::||:.....||:.|
  Fly   403 HDHCMVFVQT----KKQAHRLHILL---GLLGVRAGELHGNLTQQQRLESLKKFKEEQIDVLIAT 460

  Fly   325 DVLARGLDVPEIEWVVQWDPPSTASSFVHRVGRTARQGNEGNALVFLLPSEDAYV-HFLKINQKV 388
            ||.|||||:..::.|:.:..|.|...::||||||||.|..|.::......|...| ..:|..:..
  Fly   461 DVAARGLDIVGVKTVINFVMPITTEHYIHRVGRTARAGRAGISVSLAGEKERKIVKDIIKNAEST 525

  Fly   389 ELTKLLTEEAEDADREK-----KKLPAVLD--QLHRLQAADKGVYDKGMRAFVSHVRA-----YT 441
            ...:::..|..:..|.|     .::..:||  |..|..|..:....|..|..:.....     .|
  Fly   526 IKNRIIPPEIIEKYRNKLTSLEPEIQNILDEEQAERQLAKTEQQLSKTERKLLGQTNERRGWFQT 590

  Fly   442 KHECSA-----ILRLKDLD-----LGKMATAYGLLQLPRMPELKNYQGGGYVAPAFEVDLSKLTY 496
            |.:..|     .|...|.|     .||..|| |..:.|      .|.|.|...|         ..
  Fly   591 KQQREAEKDRLALTTGDEDKASGGKGKGKTA-GKRKRP------EYGGDGEDGP---------PV 639

  Fly   497 KNAQKEQVRQKKMETYEQTGSWPGQKQHKKRVE--SWDQTKKAKLDAKSKKELRKAKKQRKKAAE 559
            |:.:.::.::||.|..::|.....:::..|.:|  |..:.|.|||          .|:..|..|.
  Fly   640 KDLEAKRNKKKKEEPRKKTPEQLAKERAMKEIEKVSLVRAKMAKL----------RKRPGKLGAA 694

  Fly   560 AEASRS----GKGKKR--QQFSQEDLDE--------LASDIRLFKRLKK-------------NKI 597
            .|..||    ||.|:|  |.....||.:        |.|:....|::.|             ||.
  Fly   695 TEVHRSGASDGKPKRRGGQSAFTNDLTDVSRGGALRLRSEANRHKKMTKIAAKKKASSVKLTNKA 759

  Fly   598 SEEDFDKAMGIEG 610
            .:..|:|.....|
  Fly   760 GKNKFNKGKNFGG 772

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9630NP_649777.1 DEADc 6..226 CDD:238167 74/212 (35%)
DEXDc 22..232 CDD:214692 74/210 (35%)
HELICc 239..370 CDD:238034 47/143 (33%)
DUF4217 411..470 CDD:290667 18/75 (24%)
Rs1NP_001286188.1 PTZ00424 148..537 CDD:185609 129/400 (32%)
DEADc 159..364 CDD:238167 74/212 (35%)
Helicase_C 393..498 CDD:278689 38/111 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451669
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24031
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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