DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9630 and ddx18

DIOPT Version :9

Sequence 1:NP_649777.1 Gene:CG9630 / 40974 FlyBaseID:FBgn0037561 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_001003411.1 Gene:ddx18 / 321127 ZFINID:ZDB-GENE-030131-9685 Length:653 Species:Danio rerio


Alignment Length:581 Identity:200/581 - (34%)
Similarity:292/581 - (50%) Gaps:94/581 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KKWSSLDKPPLSDAVLQVVQSFGFQQMTPVQTAAIPLLLARKDVSAEAVTGSGKTLAFLVPMLEI 68
            :.::||.: .:|:..|:.|:..||..||.:|...|..||..:||.|.|.||||||||||:|.:|:
Zfish   159 RSFASLSE-VVSENTLKGVKEMGFDTMTEIQHKTIRPLLEGRDVLAAAKTGSGKTLAFLIPSIEL 222

  Fly    69 LQRRHKETPWGPKE-IGALVISPTRELARQISEVLAQFLEHEDLEHLNQQ-LIVGGNSIEEDIAT 131
            :.:    ..:.|:. .|.:|:|||||||.|...||.:.:.|    |::.. ||:||::...:...
Zfish   223 IYK----LKFMPRNGTGVIVLSPTRELAMQTYGVLKELMTH----HVHTYGLIMGGSNRSAEAQK 279

  Fly   132 LRRETPCILVCTPGRLEDLFQRKGDDLNLAAQVKSLEFLVLDEADRLLDLGFKTSVNNILGYLPR 196
            |..... |||.|||||.|..|.     ......|:|:.|::|||||:|::||:..:..|:..||:
Zfish   280 LANGVN-ILVATPGRLLDHLQN-----TPGFMFKNLQCLIIDEADRILEVGFEEELKQIIKLLPK 338

  Fly   197 QRRTGLFSATQTTEVTDLIRAGL-RNPVLVSVKEKASVNTPARLQNFYRIVEPELKFVALLEFLS 260
            :|::.|||||||.:|.||.|..| :.|:.|.|.:.....|...|:..|.:...|.:|:.|..||.
Zfish   339 KRQSMLFSATQTRKVEDLARISLKKEPLYVGVDDNKDTATVEGLEQGYVVCPSEKRFLLLFTFLK 403

  Fly   261 SPATVIGKVMVFFPTCACVEYWAEALPPL-LPKRTVLGIHGKMK-NKRANVVEKFRNTPQAVLLC 323
            ....  .|:||||.:|..|::..|.|..: ||   |:.||||.| .||.....:|.|....:|||
Zfish   404 KNRK--KKLMVFFSSCMSVKFHYELLNYIDLP---VMAIHGKQKQTKRTTTFFQFCNADSGILLC 463

  Fly   324 TDVLARGLDVPEIEWVVQWDPPSTASSFVHRVGRTARQGN-EGNALVFLLPSEDAYVHFLKINQK 387
            |||.|||||:||::|:||:|||.....::||||||||..| .|:||:.|.|.|..::.||| ..|
Zfish   464 TDVAARGLDIPEVDWIVQFDPPDDPKEYIHRVGRTARGINGRGHALLILRPEELGFLRFLK-QAK 527

  Fly   388 VELTKLLTEEAEDADREKKKLPAVLDQLHRLQAADKGVYDKGMRAFVSHVRAYTKHECSAILRLK 452
            |.|::.        :....|:..:..||.:|...:..::.....|:.|:||||..|....|..::
Zfish   528 VPLSEF--------EFSWTKISDIQSQLDKLIEKNYYLHKSAQEAYKSYVRAYDSHSLKQIYNVE 584

  Fly   453 DLDLGKMATAYGLLQLPRMPELKNYQGGGYVAPAFEVDLSKLTYKNAQKEQVRQKKMETYEQTGS 517
            .|||.|:|.::                 |:..|.| |||:           |...|         
Zfish   585 TLDLPKVAMSF-----------------GFKVPPF-VDLN-----------VHSSK--------- 611

  Fly   518 WPGQKQHKKRVESWDQTKKAKLDAKSK--KELRKAKKQRKKAAEAEASRSGKGKKRQQFSQ 576
              |.|.||:........:|:|...|:|  |.:.|                |||..| |||:
Zfish   612 --GVKLHKRGGGGGFGYQKSKNVHKAKIFKHVNK----------------GKGDGR-QFSR 653

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9630NP_649777.1 DEADc 6..226 CDD:238167 87/222 (39%)
DEXDc 22..232 CDD:214692 85/212 (40%)
HELICc 239..370 CDD:238034 59/133 (44%)
DUF4217 411..470 CDD:290667 16/58 (28%)
ddx18NP_001003411.1 SrmB 160..646 CDD:223587 194/570 (34%)
DEADc 161..368 CDD:238167 87/221 (39%)
HELICc 382..511 CDD:238034 59/133 (44%)
DUF4217 543..601 CDD:290667 17/74 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D973872at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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