DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9630 and Ddx10

DIOPT Version :9

Sequence 1:NP_649777.1 Gene:CG9630 / 40974 FlyBaseID:FBgn0037561 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_001100290.1 Gene:Ddx10 / 300710 RGDID:1308990 Length:874 Species:Rattus norvegicus


Alignment Length:679 Identity:225/679 - (33%)
Similarity:324/679 - (47%) Gaps:112/679 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 PLSDAVLQVVQSFGFQQMTPVQTAAIPLLLARKDVSAEAVTGSGKTLAFLVPMLEILQRRHKETP 77
            |||...|:.:|...::.:|.:|...|.|.|..|||...|.||||||||||||:||.|.|    ..
  Rat    75 PLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEALYR----LQ 135

  Fly    78 WGPKE-IGALVISPTRELARQISEVLAQFLEHEDLEHLNQQLIVGGNSIEEDIATLRRETPCILV 141
            |...: :|.|:||||||||.|..|||.:..::.|   .:..||:||..::.:...:....  |||
  Rat   136 WTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHD---FSAGLIIGGKDLKHEAERINNIN--ILV 195

  Fly   142 CTPGRLEDLFQRKGDDLNLAAQVKSLEFLVLDEADRLLDLGFKTSVNNILGYLPRQRRTGLFSAT 206
            |||||   |.|..  |..:.....:|:.||||||||:||:||..::|.|:..||::|:|.|||||
  Rat   196 CTPGR---LLQHM--DETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKRQTLLFSAT 255

  Fly   207 QTTEVTDLIRAGLRNPVLVSVKEKASVNTPARLQNFYRIVEPELKFVALLEFLSSPATVIGKVMV 271
            ||..|.||.|..|::|..|.|.|||..:|||.|:..|.|.|...|...|..||.|..|  .|.:|
  Rat   256 QTKSVKDLARLSLKDPEYVWVHEKAKYSTPATLEQNYIICELHQKISVLFSFLRSHLT--KKSIV 318

  Fly   272 FFPTCACVEYWAEALPPLLPKRTVLGIHGKMKN-KRANVVEKFRNTPQAVLLCTDVLARGLDVPE 335
            ||.:|..|:|.......|.|..::|.:||:.:. :|..|..:|.....|||..||:.|||||.|.
  Rat   319 FFSSCKEVQYLYRVFCRLRPGISILALHGRQQQMRRMEVYNEFVRKRAAVLFATDIAARGLDFPA 383

  Fly   336 IEWVVQWDPPSTASSFVHRVGRTARQGNEGNALVFLLPSEDAYVHFLKINQKVELTKLLTEEAED 400
            :.||:|:|.|..|::::||.|||||...:|.||:.|||||:..:....:.:||.:.::..     
  Rat   384 VNWVLQFDCPEDANTYIHRAGRTARYKEDGEALLILLPSEEQGMVQQLLQKKVPVKEIKI----- 443

  Fly   401 ADREKKKLPAVLDQLHRLQAADKGVYDKGMRAFVSHVRAYTKHECSAILRLKDLDLGKMATAYGL 465
               ..:||..|..:|....|.|:.:.::..|.|||::|:....:...:..:..|.:.:.|.:.||
  Rat   444 ---NPEKLIDVQKRLESFLAQDQDLKERAQRCFVSYIRSVYLMKDKEVFDVNKLPITEYALSLGL 505

  Fly   466 LQLPRMPELKNYQ-------GGGYVAPAFEVDLSKLT------------------YKNA------ 499
            ...||:..|:..:       |...|..|.:.....||                  :|:.      
  Rat   506 AVAPRIRFLQKMEKQPNKELGKNQVTEAIQPRAPSLTSDEVEEFRAYFSEKMSILHKSGKRLEET 570

  Fly   500 -----------QKEQVRQKKMETY------EQTGSWP----GQKQHKKRVESWDQ---------- 533
                       |.|:...::||.:      ..|.|.|    .||..:..|:..|:          
  Rat   571 EHSLASGESEEQDEETEDEEMEDHVGQTREPPTDSVPRSEEAQKVKEVPVQFLDRDDDEEDGPDA 635

  Fly   534 ---TKKAK----LDAK-----SKKELRKA--KKQRKKAAEAE--ASRSGKGKKRQQFSQEDLDEL 582
               |.|.:    ||.|     ||||..|:  ||:..|.|||:  ..|:.|..|:..|:.|  .||
  Rat   636 DFLTVKRRDVFGLDLKENEALSKKEPSKSSVKKKLTKVAEAKKVMKRNFKVNKKITFTDE--GEL 698

  Fly   583 ASDIRLFKRLKKNKISEED------FDKA 605
            .......::...|.:.|||      .|||
  Rat   699 VQQWPQIQKCATNDVEEEDDTGGINLDKA 727

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9630NP_649777.1 DEADc 6..226 CDD:238167 93/213 (44%)
DEXDc 22..232 CDD:214692 93/210 (44%)
HELICc 239..370 CDD:238034 52/131 (40%)
DUF4217 411..470 CDD:290667 13/58 (22%)
Ddx10NP_001100290.1 SrmB 69..538 CDD:223587 181/486 (37%)
DEADc 71..275 CDD:238167 93/213 (44%)
HELICc 288..418 CDD:238034 52/131 (40%)
DUF4217 451..510 CDD:290667 13/58 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D973872at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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