DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9630 and Ddx49

DIOPT Version :10

Sequence 1:NP_649777.1 Gene:CG9630 / 40974 FlyBaseID:FBgn0037561 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_001020093.2 Gene:Ddx49 / 234374 MGIID:2136689 Length:480 Species:Mus musculus


Alignment Length:572 Identity:160/572 - (27%)
Similarity:256/572 - (44%) Gaps:137/572 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LSDAVLQVVQSFGFQQMTPVQTAAIPLLLARKDVSAEAVTGSGKTLAFLVPMLEILQRRHKETPW 78
            ||..:::..:..|.:|.||||...||.:|..:|....|.||||||.||::|:|:.|    .|.|:
Mouse     9 LSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQKL----SEDPY 69

  Fly    79 GPKEIGALVISPTRELARQISE---VLAQFLEHEDLEHLNQQLIVGGNSIEEDIATLRRETPCIL 140
            |   |..||::||||||.||:|   ||.:.|..:|.      :||||..:......|.|: |.::
Mouse    70 G---IFCLVLTPTRELAYQIAEQFRVLGKPLGLKDC------IIVGGMDMVAQALELSRK-PHVV 124

  Fly   141 VCTPGRLEDLFQRKGDDLNLAAQVKSLEFLVLDEADRLLDLG---FKTSVNNILGYLPRQRRTGL 202
            :.|||||.| ..|..:..|:    |.::|||:|||||||:.|   |.|.:..||..:|.:|:|.|
Mouse   125 IATPGRLAD-HLRSSNTFNM----KKIQFLVMDEADRLLEQGCTDFTTDLETILAAVPARRQTLL 184

  Fly   203 FSATQTTEVTDLIRAGLRNPVLVSVKEKASVNTPARLQNFYRIVEPELKFVALLEFLSSPATVIG 267
            ||||.|..:.:|.......|..  .:.:|:|.|..:|...|.:|..::|...|:..:.:....:.
Mouse   185 FSATLTDTLKELQGLATNEPFF--WEAQATVRTVEQLDQRYLLVPEKVKDAYLVHLVQTFQDQLE 247

  Fly   268 --KVMVFFPTC-ACVEYWAEALPPLLPKRT--VLGIHGKMKNK-RANVVEKFRNTPQAVLLCTDV 326
              .:::|..|| .|     :.|..:|.|..  .:.:|..||.| |...:.||:::...:|:.|||
Mouse   248 DCSIIIFTNTCKTC-----QILCMMLRKFNFPTVALHSMMKQKERFAALAKFKSSIYRILIATDV 307

  Fly   327 LARGLDVPEIEWVVQWDPPSTASSFVHRVGRTARQGNEGNALVFLLPSEDAYVHFLKINQKVELT 391
            .:||||:|.::.|:..:.|.....::||||||||.|.:|.|:..:...:...:|.::...|.:|.
Mouse   308 ASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDIHLLHAIEEQIKQQLA 372

  Fly   392 KLLTEEAEDADREKKKLPAVLDQLHRLQAADKGVYDKGMRAFVSHVRAYTKHECSAILRLKDLDL 456
            :|:.||||        :..:|.|::                       ..:.||...|.....| 
Mouse   373 ELVVEEAE--------VLQILTQVN-----------------------VVRRECEIKLEASHFD- 405

  Fly   457 GKMATAYGLLQLPRMPELKNYQGGGYVAPAFEVDLSKLTYKNAQKEQVRQKKMETYEQTGSWPGQ 521
                                                       :|:::.::|....|        
Mouse   406 -------------------------------------------EKKEINKRKQMILE-------- 419

  Fly   522 KQHKKRVESWDQTKKAKLDAKSKKELRKAKKQRKKAAEAEASRSGKGKKRQQ 573
                        .|...|:||.|.||.|.|:|.::..|    :.|:..:||:
Mouse   420 ------------GKDPDLEAKRKAELAKIKQQNRRFKE----KVGQTLRRQK 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9630NP_649777.1 DEADc_DDX55 18..226 CDD:350718 83/213 (39%)
SF2_C_DEAD 239..371 CDD:350174 41/137 (30%)
DUF4217 414..470 CDD:464056 5/55 (9%)
Ddx49NP_001020093.2 SrmB 1..380 CDD:440279 135/396 (34%)
Q motif 2..30 7/20 (35%)
DEAD box 152..155 2/2 (100%)
PRK03918 <364..>447 CDD:235175 27/181 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 438..480 5/22 (23%)

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