DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9630 and rde-12

DIOPT Version :9

Sequence 1:NP_649777.1 Gene:CG9630 / 40974 FlyBaseID:FBgn0037561 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_001256533.1 Gene:rde-12 / 179855 WormBaseID:WBGene00010280 Length:959 Species:Caenorhabditis elegans


Alignment Length:473 Identity:128/473 - (27%)
Similarity:206/473 - (43%) Gaps:107/473 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LSDAVLQVVQSFGFQQMTPVQTAAIPLLLARKDVSAEAVTGSGKTLAFLVPMLEILQRRHKET-- 76
            |...:|:.::...:..:..:|.|.||.:|...||..:|.|.:|||.||.:|:::.:.|..:||  
 Worm   387 LHPTILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSAGKTAAFGLPIIDKILRMDEETRN 451

  Fly    77 ----PWGPKEIGALVISPTRELARQISEVLAQFLEHEDLEHLNQQLIVGGNSIEEDIATLRRETP 137
                ..||.   ||:::||||||.||.|.|..:.::.|:..|   |..|.:.....:..:|  ..
 Worm   452 KARQDDGPL---ALILAPTRELAAQIHEALRTYCQNTDIIVL---LSYGQSDRARSLNEIR--NG 508

  Fly   138 C-ILVCTPGRLEDLFQRKGDDLNLAAQVKS------LEFLVLDEADRLLD------LGFKTSVNN 189
            | ||:.|.||:.|.            .|||      |.|||.|||||||.      ||...::..
 Worm   509 CDILIGTCGRIMDF------------TVKSHISLLHLRFLVFDEADRLLQDMKKDPLGHLGAIIK 561

  Fly   190 ILGYL----PRQ--RRTGLFSATQTTEVTDLIRAGLRNP--------VLVSVKEKASVNTPARLQ 240
            ..|::    .||  ..:..|:|:..|...:|::   |.|        ||.:.:....||.     
 Worm   562 DAGFMESAATRQTIMTSATFNASVMTVANELMK---RLPGQDEMIKIVLANGRLSKRVNL----- 618

  Fly   241 NFYR---IVEPELKFVALLEFLSSPATVIGKVMVFF------PTCACVEYWAEALPPLLPKRTVL 296
            .|:.   :.|...|...:|:...:..|:  |.::|.      ..||.             |.|..
 Worm   619 EFFECKGLAEKNAKLREILKQNVNGKTL--KTIIFVQKKDQCDACAA-------------KLTSG 668

  Fly   297 G-----IHG-KMKNKRANVVEKFRNTPQAVLLCTDVLARGLDVPEIEWVVQW-----DPPSTASS 350
            |     :|| :.::.|..::..|::....:|:.||:|:||:||.:::.|:.:     ||...|.:
 Worm   669 GMLAQTLHGDRSQDMREKLINDFKSNRVNLLVTTDLLSRGIDVSDLDRVINFDLPDGDPDQGADT 733

  Fly   351 FVHRVGRTARQGNEGNALV--FLLPSEDAYVHFLKINQKVELTKLLTEEAEDADREKKKLPAVLD 413
            |:||.|||.|.|.:.|.|.  |:.|..|.  ..|...:.|||  ::::...|.     |:|..||
 Worm   734 FIHRAGRTGRTGRKENGLCVSFVDPQSDR--DSLLAPKLVEL--IISQNLPDL-----KVPDFLD 789

  Fly   414 QLHRLQAADKGVYDKGMR 431
            .:.:......|....|.|
 Worm   790 AMAKSSRGKSGTSGFGQR 807

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9630NP_649777.1 DEADc 6..226 CDD:238167 73/244 (30%)
DEXDc 22..232 CDD:214692 71/242 (29%)
HELICc 239..370 CDD:238034 38/152 (25%)
DUF4217 411..470 CDD:290667 5/21 (24%)
rde-12NP_001256533.1 PTZ00110 230..799 CDD:240273 125/463 (27%)
P-loop_NTPase 382..594 CDD:304359 69/226 (31%)
HELICc 628..755 CDD:238034 37/141 (26%)
Nucleoporin_FG <867..950 CDD:290362
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D973872at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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