DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9630 and ddx-10

DIOPT Version :9

Sequence 1:NP_649777.1 Gene:CG9630 / 40974 FlyBaseID:FBgn0037561 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_490989.1 Gene:ddx-10 / 171810 WormBaseID:WBGene00021277 Length:732 Species:Caenorhabditis elegans


Alignment Length:662 Identity:207/662 - (31%)
Similarity:308/662 - (46%) Gaps:110/662 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 PLSDAVLQVVQSFGFQQMTPVQTAAIPLLLARKDVSAEAVTGSGKTLAFLVPMLEILQRRHKETP 77
            |||...|:.::...:.:.|.:|...|...|...||...|.||||||||.::|:||.|.|    ..
 Worm    82 PLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEALWR----AK 142

  Fly    78 WGPK-EIGALVISPTRELARQISEVLAQFLEHEDLEHLNQQLIVGGNSIEEDIATLRRETP--CI 139
            |.|. .:|||:||||||||.|....:.....|..   .:..|::||:    |:|..|....  .|
 Worm   143 WSPDYGLGALIISPTRELALQTFSTINAVGAHHG---FSCGLVIGGS----DVAFERNRISGINI 200

  Fly   140 LVCTPGRLEDLFQRKGDDLNLAAQVKSLEFLVLDEADRLLDLGFKTSVNNILGYLPRQRRTGLFS 204
            :||||||   |.|..  |.|......||:.||||||||:||:||...:|:|:..||.:|:|.|||
 Worm   201 IVCTPGR---LLQHM--DENAQMSCDSLQVLVLDEADRMLDMGFSKQLNSIINNLPAERQTLLFS 260

  Fly   205 ATQTTEVTDLIRAGLRNPVLVSVKEKASVNTPARLQNFYRIVEPELKFVALLEFLSSPATVIGKV 269
            ||||..|.||.|....:||.|||.|.||..||..|:..|.|||.|.|..||..|:.:...  .|.
 Worm   261 ATQTRNVKDLCRVCTNDPVFVSVHENASAATPDNLKQSYVIVEEEHKINALWSFIEAHRK--KKS 323

  Fly   270 MVFFPTCACVEYWAEALPPLLPKRTVLGIHGKM-KNKRANVVEKFRNTPQAVLLCTDVLARGLDV 333
            :||..:|....:..||...|.|...|:|:.|.| :.||.....||..:..|||:.|||.:||||.
 Worm   324 LVFVSSCKQARFLTEAFSQLRPGLPVMGLWGTMNQKKRIETFTKFDESKAAVLIATDVASRGLDF 388

  Fly   334 PEIEWVVQWDPPSTASSFVHRVGRTARQGNEGNALVFLLPS-EDAYV-----HFLKINQ------ 386
            ..|:||:|.|.|:....::|||||:||..:.||:|:.:.|| |:|.:     |.:.|.:      
 Worm   389 EHIDWVIQVDCPAQIDDYIHRVGRSARMDDSGNSLLMVSPSQEEAMIGKLEKHSIPIEELKIHPD 453

  Fly   387 -----KVELTKLLTEEAEDADREKKKLPAVLDQLHRLQAADKGVYDKGMRAFVSHVRAYTKHECS 446
                 :|:|..:|.|..|..:..:|.:.|.|..::.::  ||.|:|                   
 Worm   454 AMSDVRVKLRAILAESQELKEYAQKSIVAYLRSIYTMK--DKKVFD------------------- 497

  Fly   447 AILRLKDLDLGKMATAYGLLQLPRM----------------PELKNYQGGGYVAPAFEV-----D 490
                ::.:|...:|.::||:.:||:                .|:|..:....:...|.:     |
 Worm   498 ----VEAIDAAALADSFGLVSVPRVRFLNKKAKKSGEKLMEKEVKEEEEEASLVGKFAIDEDDED 558

  Fly   491 LSKLTYKNAQKEQVRQKKME------TYEQTGSWPGQKQHKKRVESWDQTKK---AKLDAKSKKE 546
            :..:.....:.||:::::..      |..:|      |..||.|......||   .||...:||.
 Worm   559 IFTVKKPTGEPEQIKEEEAAEKISNITISKT------KPLKKAVTKVSAAKKILNKKLKVNTKKT 617

  Fly   547 LRKAKKQRKKAAEAEASRSGKG----KKRQQFSQEDLDE------LASDIRLFKRLKKNKISEED 601
            ......:.::..|..::.:..|    |.||:....|.::      |....|..|..|||:.:||:
 Worm   618 FGAEDDELEELEEGPSTITSYGLDIEKARQEIKSGDKEDRKRFKLLREQRRQEKLAKKNRRAEEE 682

  Fly   602 FDKAMGIEGNND 613
            .......:|:.|
 Worm   683 EAVEYDEDGSED 694

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9630NP_649777.1 DEADc 6..226 CDD:238167 89/215 (41%)
DEXDc 22..232 CDD:214692 89/212 (42%)
HELICc 239..370 CDD:238034 52/131 (40%)
DUF4217 411..470 CDD:290667 9/58 (16%)
ddx-10NP_490989.1 SrmB 52..511 CDD:223587 169/471 (36%)
DEADc 78..282 CDD:238167 89/215 (41%)
Helicase_C 305..416 CDD:278689 43/112 (38%)
DUF4217 461..517 CDD:290667 15/80 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D973872at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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