DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9630 and Ddx55

DIOPT Version :9

Sequence 1:NP_649777.1 Gene:CG9630 / 40974 FlyBaseID:FBgn0037561 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_001258255.1 Gene:Ddx55 / 100362764 RGDID:2324094 Length:600 Species:Rattus norvegicus


Alignment Length:609 Identity:299/609 - (49%)
Similarity:405/609 - (66%) Gaps:47/609 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 WSSLDKPPLSDAVLQVVQSFGFQQMTPVQTAAIPLLLARKDVSAEAVTGSGKTLAFLVPMLEILQ 70
            |.|| :.||...||..::..||..|||||:|.|||.:..|||:|||||||||||||::|:||||.
  Rat     9 WESL-QVPLHPLVLGALRELGFLHMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILL 72

  Fly    71 RRHKETPWGPKEIGALVISPTRELARQISEVLAQFLEHEDLEHLNQQLIVGGNSIEEDIATLRRE 135
            ||.::..  ..::||:||:||||||.||.|||:.|.:|  ....:|.|.:||.:..||:...::.
  Rat    73 RREEKLK--KNQVGAIVITPTRELAIQIDEVLSHFTKH--FPQFSQILWIGGRNPGEDVERFKQH 133

  Fly   136 TPCILVCTPGRLEDLFQRKGDDLNLAAQVKSLEFLVLDEADRLLDLGFKTSVNNILGYLPRQRRT 200
            ...|:|.|||||||:|:||.:.|:||:.||||:.|||||||||||:||:.|:|.||.:||:||||
  Rat   134 GGNIIVATPGRLEDMFRRKAEGLDLASYVKSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRT 198

  Fly   201 GLFSATQTTEVTDLIRAGLRNPVLVSVKEK-----ASVNTPARLQNFYRIVEPELKFVALLEFLS 260
            ||||||||.||.:|:||||||||.:|||||     ::..||:||:|.|.|.:.:.||..|:.||.
  Rat   199 GLFSATQTQEVENLVRAGLRNPVRISVKEKGVAASSTQKTPSRLENHYMICKADEKFNQLVHFLR 263

  Fly   261 SPATVIGKVMVFFPTCACVEYWAEALPPLLPKRTVLGIHGKMKNKRANVVEKFRNTPQAVLLCTD 325
            |...  .|.:|||.|||||||:.:||..|:.:..:|.||||||.||..:..:||.....:|:|||
  Rat   264 SRQQ--EKHLVFFSTCACVEYYGKALEALVQRVKILCIHGKMKYKRNKIFMEFRKLQSGILVCTD 326

  Fly   326 VLARGLDVPEIEWVVQWDPPSTASSFVHRVGRTARQGNEGNALVFLLPSEDAYVHFLKINQKVEL 390
            |:|||:|:||:.||:|:||||.||:||||.|||||.|:.|:|||||||.|:||::||.||||..|
  Rat   327 VMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSALVFLLPMEEAYINFLAINQKCPL 391

  Fly   391 TKL-LTEEAEDADREKKKLPAVLDQLHRLQAADKGVYDKGMRAFVSHVRAYTKHECSAILRLKDL 454
            .:: |.....|          :|.:|..:..||:.|::|||:||||.|:||.|||||.|.|||||
  Rat   392 QEMSLQRNTVD----------LLPKLRAMALADRAVFEKGMKAFVSFVQAYAKHECSLIFRLKDL 446

  Fly   455 DLGKMATAYGLLQLPRMPELKNYQGGGYVAPAFEVDLSKLTYKNAQKEQVRQKKMETYEQTGSWP 519
            |...:|..:.||::|||||||..|...:|  ..::|...:.:|:..:|:.|||.:|         
  Rat   447 DFAGLARGFALLRMPRMPELKGKQFPDFV--PVDIDTDTIPFKDKIREKQRQKLLE--------- 500

  Fly   520 GQKQHKKRVESWDQTKKAKLDAKSKKELRKAKKQRKKAAEAEASRSGKGKKRQ--QFSQEDLDEL 582
              ::.|:|.|:..:.|..|..|.||   :||||:|||...|      |.||.:  ....||::||
  Rat   501 --QKRKERTENEGRRKFIKNKAWSK---QKAKKERKKKMNA------KRKKDEGSDIDDEDMEEL 554

  Fly   583 ASDIRLFKRLKKNKISEEDFDKAM 606
            .:|.||.|:.||.||:||:|:|.:
  Rat   555 LNDTRLLKKFKKGKITEEEFEKGL 578

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9630NP_649777.1 DEADc 6..226 CDD:238167 125/219 (57%)
DEXDc 22..232 CDD:214692 123/214 (57%)
HELICc 239..370 CDD:238034 68/130 (52%)
DUF4217 411..470 CDD:290667 30/58 (52%)
Ddx55NP_001258255.1 DEADc 9..224 CDD:238167 125/219 (57%)
DEXDc 24..228 CDD:214692 121/207 (58%)
Helicase_C 252..363 CDD:278689 60/112 (54%)
DUF4217 403..462 CDD:290667 30/58 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166352262
Domainoid 1 1.000 201 1.000 Domainoid score I2932
eggNOG 1 0.900 - - E2759_KOG0345
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H12196
Inparanoid 1 1.050 527 1.000 Inparanoid score I1189
OMA 1 1.010 - - QHG53613
OrthoDB 1 1.010 - - D273989at33208
OrthoFinder 1 1.000 - - FOG0003582
OrthoInspector 1 1.000 - - oto98113
orthoMCL 1 0.900 - - OOG6_102339
Panther 1 1.100 - - LDO PTHR24031
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2452
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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