DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mcm2 and MCM8

DIOPT Version :9

Sequence 1:NP_477121.1 Gene:Mcm2 / 40973 FlyBaseID:FBgn0014861 Length:887 Species:Drosophila melanogaster
Sequence 2:NP_001268450.1 Gene:MCM8 / 84515 HGNCID:16147 Length:880 Species:Homo sapiens


Alignment Length:864 Identity:239/864 - (27%)
Similarity:380/864 - (43%) Gaps:205/864 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 NLEDTKGHSTKEWVSMLGPRTEIANRFQSFLRTFVDERG-----AYTYRDR---IRRMCEQNMSS 214
            :|..|.|..|.|........|:.....||.|..|:..:|     :..|.|.   |.::  |....
Human    39 DLSKTTGKRTSEQTPQFLLSTKTPQSMQSTLDRFIPYKGWKLYFSEVYSDSSPLIEKI--QAFEK 101

  Fly   215 FVVSYTDLANKEHV------------------LAYFLPEAPFQMLEIFDKVAKDMVLSIFPT--- 258
            |...:.||.:|:.:                  :...:|:...::.:..:|....|.|:|...   
Human   102 FFTRHIDLYDKDEIERKGSILVDFKELTEGGEVTNLIPDIATELRDAPEKTLACMGLAIHQVLTK 166

  Fly   259 -YERVTTE-------------------IHVRISELPLIEELRTFRKLHLNQLVRTLGVVTATTGV 303
             .||...|                   ||.|:.....:.:|:..|..:..:.:...|.|...:.:
Human   167 DLERHAAELQAQEGLSNDGETMVNVPHIHARVYNYEPLTQLKNVRANYYGKYIALRGTVVRVSNI 231

  Fly   304 LPQLSVIKYDCVKCGYVLGPFVQSQNTEIKPGSC--PECQS-------TGPFSINMEQTLYRNYQ 359
            .|..:.:.:.|..||.:.. |.........|..|  |.|:.       :.|.::.|:      :|
Human   232 KPLCTKMAFLCAACGEIQS-FPLPDGKYSLPTKCPVPVCRGRSFTALRSSPLTVTMD------WQ 289

  Fly   360 KITLQE--SPGRIPAGRIPRSKDVILLADLCDQCKPGDELEVTGI--YTNNYDGSLNTDQGFPVF 420
            .|.:||  |..:..||||||:.:..|:.||.|.|.|||.:.:|||  .:|..:||.|.:... :|
Human   290 SIKIQELMSDDQREAGRIPRTIECELVHDLVDSCVPGDTVTITGIVKVSNAEEGSRNKNDKC-MF 353

  Fly   421 ATVIIANHVVVKDSK-QVVQSLTD------------EDIATIQKLSKDPRIVERVV---ASMAP- 468
            ...|.||.  :.:|| |..:|..|            :|:..||::..:..:.:.:|   .:::| 
Human   354 LLYIEANS--ISNSKGQKTKSSEDGCKHGMLMEFSLKDLYAIQEIQAEENLFKLIVKWSLALSPR 416

  Fly   469 -----SIYGHD-------------------------------YIKRALALALFGGESKNPGEKHK 497
                 :|..|.                               .:|..||||||||..|...:|::
Human   417 LEYSGAISAHCNLHLPSSNSSPTSACRVAGTTGMRHQTQLLLLVKAGLALALFGGSQKYADDKNR 481

  Fly   498 --VRGDINLLICGDPGTAKSQFLKYTEKVAPRAVFTTGQGASAVGLTAYVRRNPVSREWTLEAGA 560
              :|||.::|:.||||..|||.|:....||||.|:..|...:..|||..:.::..|.::.|||||
Human   482 IPIRGDPHILVVGDPGLGKSQMLQAACNVAPRGVYVCGNTTTTSGLTVTLSKDSSSGDFALEAGA 546

  Fly   561 LVLADQGVCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTSLQARCTVIAAANPIGGRYDPS 625
            |||.|||:|.|||||||.:|.: ::.|||||||||::|||:|.||.||.::||||||:||.|:.:
Human   547 LVLGDQGICGIDEFDKMGNQHQ-ALLEAMEQQSISLAKAGVVCSLPARTSIIAAANPVGGHYNKA 610

  Fly   626 MTFSENVNLSEPILSRFDVLCVVKDEFDPMQDQQLAKFVVH--------------SHMKHHPSEE 676
            .|.|||:.:...:|||||::.::.|..:...|..|::.|:.              :.|....|..
Human   611 KTVSENLKMGSALLSRFDLVFILLDTPNEHHDHLLSEHVIAIRAGKQRTISSATVARMNSQDSNT 675

  Fly   677 EQPEL--EEP---QLK-----TVDEIPQDLLRQYIVYAKENIRPKLTNIDEDKIAKMYAQLRQES 731
            ...|:  |:|   :||     |:|.||..|||:||.||::.:.|:|:......:...|.:||::|
Human   676 SVLEVVSEKPLSERLKVVPGETIDPIPHQLLRKYIGYARQYVYPRLSTEAARVLQDFYLELRKQS 740

  Fly   732 FATGSLPITVRHIESVIRMSEAHARMHLRENVMEADVSMAIRMMLESFIEAQKFSVM-------- 788
            ....|.|||.|.:||:||::||.||:.|||...:.|.        |..:|..|:|::        
Human   741 QRLNSSPITTRQLESLIRLTEARARLELREEATKEDA--------EDIVEIMKYSMLGTYSDEFG 797

  Fly   789 ------------KKMRSTFQKYLSFQKDHSE------LLFFILRQL----------------TLD 819
                        ...|||.::::|...:.:|      ..|..|||:                :|:
Human   798 NLDFERSQHGSGMSNRSTAKRFISALNNVAERTYNNIFQFHQLRQIAKELNIQVADFENFIGSLN 862

  Fly   820 QLAYIRCKDGPGATHVEIM 838
            ...|: .|.||....::.|
Human   863 DQGYL-LKKGPKVYQLQTM 880

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm2NP_477121.1 MCM2_N 59..166 CDD:372227 3/7 (43%)
MCM_N 184..270 CDD:379644 23/134 (17%)
MCM 276..780 CDD:214631 191/595 (32%)
MCM8NP_001268450.1 MCM_N 98..223 CDD:291233 17/124 (14%)
Mcm2 139..877 CDD:224162 219/757 (29%)
AAA 475..633 CDD:99707 78/158 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1241
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D232729at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

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