DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm2 and MCM8

DIOPT Version :9

Sequence 1:NP_477121.1 Gene:Mcm2 / 40973 FlyBaseID:FBgn0014861 Length:887 Species:Drosophila melanogaster
Sequence 2:NP_001319512.1 Gene:MCM8 / 820123 AraportID:AT3G09660 Length:801 Species:Arabidopsis thaliana


Alignment Length:784 Identity:234/784 - (29%)
Similarity:376/784 - (47%) Gaps:150/784 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 GEKAAVGEVEDTEM------------VESIENL--EDTKGHSTKEWVSMLGPRTEIANRFQSFLR 189
            |...|.|..|.|.:            ::..|||  ::.|...|.|                 .:|
plant     6 GGSMASGRPESTGIDSLGIGKILAVYIKDNENLAIDEDKLQLTAE-----------------LIR 53

  Fly   190 TFVDERGAYTYRDRIRRMCEQNMSSFVVS--------YTDLANKEHVLAYF--LPEAPFQMLEIF 244
            .|....|    ||.:.::.|....||.:|        .:|:.|      :|  |.:.|..::...
plant    54 VFSASPG----RDIVSQVNEDGGGSFSLSLDLQQFKKISDIEN------FFINLEDNPKGVIPCM 108

  Fly   245 DKVAKDMVLSIFPT--YERVTTEIHVRISELPLIE-ELRTFRKLHLNQLVRTLGVVTATTGVLPQ 306
            :.....::...:.|  :|.| .:|:||:...|... .|:..|..::.:||...|.|...:.|.|.
plant   109 NAAVHKVLFDQWETNEFENV-MKINVRLHNYPESSISLKNLRAAYIGKLVTVHGTVVKVSTVKPL 172

  Fly   307 LSVIKYDCVKC--GYVLGPFVQSQNTEIKPGSCPECQSTG-------PFSINMEQTLYRNYQKIT 362
            ::.:.:||.||  |      :..:.|:.|.....:|.|.|       |.. :..||:  ::|||.
plant   173 VTQMAFDCGKCKTG------ITREFTDGKFSPPLKCDSHGCKSKTFTPIR-SSAQTI--DFQKIR 228

  Fly   363 LQE--SPGRIPAGRIPRSKDVILLADLCDQCKPGDELEVTGI--YTNNY----DGSLNT-DQGFP 418
            :||  .|.....||:||:.:..|:.||.|.|.|||.:.||||  ..|||    .|...| :||| 
plant   229 VQELQKPEDHEEGRVPRTVECELMEDLVDICIPGDVVTVTGIIGVINNYMDIGGGKSKTKNQGF- 292

  Fly   419 VFATVIIANHVVVKDSKQV--------------------VQSLTDEDIATIQKLSKD--PRIVER 461
               ..:....|.||::|:.                    :.|.:..|:..|.|..::  .....|
plant   293 ---YYLFIEAVSVKNTKRQSAFENSEDSSSSAQTADVGDLYSFSQRDLEFIVKFKEEYGSDTFRR 354

  Fly   462 VVASMAPSIYGHDYIKRALALALFGGESKNPGEKHK--VRGDINLLICGDPGTAKSQFLKYTEKV 524
            ::.|:.||||||:.:|..:.|:||||..|:..:::|  |||||:::|.||||..|||.|:....:
plant   355 ILHSVCPSIYGHEIVKAGITLSLFGGVRKHSMDRNKVPVRGDIHVIIVGDPGLGKSQLLQAAAAI 419

  Fly   525 APRAVFTTGQGASAVGLTAYVRRNPVSREWTLEAGALVLADQGVCLIDEFDKMNDQDRTSIHEAM 589
            :||.::..|...:..|||..|.::.::.::..||||:||||.|:|.|||||||..:.: ::.|||
plant   420 SPRGIYVCGNATTRAGLTVAVVKDSMTNDYAFEAGAMVLADGGLCCIDEFDKMTTEHQ-ALLEAM 483

  Fly   590 EQQSISISKAGIVTSLQARCTVIAAANPIGGRYDPSMTFSENVNLSEPILSRFDVLCVVKDEFDP 654
            |||.:|::|||:|.||.||.:|||||||:||.|:.:.|.:||:.:|..:|||||::.::.|:.|.
plant   484 EQQCVSVAKAGLVASLSARTSVIAAANPVGGHYNRAKTVNENLKMSAALLSRFDLVFILLDKPDE 548

  Fly   655 MQDQQLAKFVVHSHMKHHPSEEEQPELEE------------------------PQLKTVDE---- 691
            :.|:|:::   |....|..|.|..|.|::                        .:|:...|    
plant   549 LLDKQVSE---HIMSLHSASGETSPALKKFKPVNAASQNAGYANMHAEGNSLLSRLRLDSEKDDD 610

  Fly   692 ---IPQDLLRQYIVYAKENIRPKLTNIDEDKIAKMYAQLRQESFATGSLPITVRHIESVIRMSEA 753
               :|..|||:||.||:..:.||::....:.|.|.|.:||..:.:..|.|||.|.:||::|:::|
plant   611 FSPVPGQLLRKYISYARNFVNPKMSKDAGEIIQKFYLKLRDHNTSADSTPITARQLESLVRLAQA 675

  Fly   754 HARMHLRENVMEADVSMAIRMMLESFIE--AQKFSVMKKMRSTFQKYLSFQKDHSELLFFILRQL 816
            .||:.|||.:...|....:.:|.||..:  ..:..|:...||   ..:|.||:....|..:.:|.
plant   676 RARVDLREEITVQDAMDVVEIMKESLYDKLIDEHGVVDFGRS---GGMSQQKEAKRFLSALDKQS 737

  Fly   817 TLDQ 820
            .|.|
plant   738 ELQQ 741

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm2NP_477121.1 MCM2_N 59..166 CDD:372227 9/40 (23%)
MCM_N 184..270 CDD:379644 19/97 (20%)
MCM 276..780 CDD:214631 192/577 (33%)
MCM8NP_001319512.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1241
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D266497at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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