DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mcm2 and mcm6

DIOPT Version :9

Sequence 1:NP_477121.1 Gene:Mcm2 / 40973 FlyBaseID:FBgn0014861 Length:887 Species:Drosophila melanogaster
Sequence 2:NP_001076318.1 Gene:mcm6 / 566409 ZFINID:ZDB-GENE-030909-6 Length:830 Species:Danio rerio


Alignment Length:855 Identity:242/855 - (28%)
Similarity:394/855 - (46%) Gaps:169/855 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 GEKAAVGEVEDTEMVESIENLEDTKGHSTKEWVSMLGPRTEIANRFQSFLRTFVDERGAYTYRDR 203
            |.....|:|...|:.|..:.|                        ||:||..|.:..|...|...
Zfish     7 GVNQNAGQVIKDELAEKCQKL------------------------FQAFLEEFQNSDGEVKYLRD 47

  Fly   204 IRRMCEQNMSSFVVSYTDLANKEHVLAYFLPEAPFQMLEIFDKVAKDMVL--SIFPTYERVTTEI 266
            ...:.....::..||:|||......||..:.|..:::.....:..::...  ...||    :.|.
Zfish    48 AEELIRPERNTLAVSFTDLEGFNQELATAIQEEFYRLYPYLCRAVRNFAREHGEVPT----SKEF 108

  Fly   267 HVRISELPLIEELRTFRKLHLNQLVRTLGVVTATTGVLPQLSVIKYDCVKCGYVLGPFVQSQNTE 331
            :|...:||...::|....:.:..|||..|.|..|..|.|:|....:.|:.|..|:.. |:.|...
Zfish   109 YVAFQDLPTRHKIRELTTVKVGSLVRISGQVVRTHPVHPELVSGTFLCLDCQGVIKD-VEQQFKY 172

  Fly   332 IKPGSC--PECQSTGPFSINMEQTLYRNYQKITLQESPGRIPAGRIPRSKDVILLADLCDQCKPG 394
            .:|..|  |.|.:...|.::..::.:.::||:.:||:...:|.|.||||.:|||.|:..:..:.|
Zfish   173 TQPSICRNPVCNNRRRFLLDTNKSKFIDFQKLRIQETQAELPRGSIPRSMEVILRAEAVESAQAG 237

  Fly   395 D---------------ELEVTGIYTNNYDGSLNTDQGFP---------------VFATVIIANHV 429
            |               :|...|:.......:... ||:.               .:....:|.||
Zfish   238 DKCDFIGSLIVVPDISQLATPGVRAETSSRTAGV-QGYENEGLRGLKALGVRELSYKLAFLACHV 301

  Fly   430 V----------VKDSKQVVQS----LTDEDIATIQKLSKDPRIVERVVASMAPSIYGHDYIKRAL 480
            .          ::|.:|..:|    ::.::...:.::|:|..:...:..|:.|:|:|:|.:||.:
Zfish   302 APTNPRFGGKEIRDEEQTAESIKKQMSVQEWEKVFEMSQDKNLYHNLCTSLFPTIHGNDEVKRGI 366

  Fly   481 ALALFGGESKNPGEKHKVRGDINLLICGDPGTAKSQFLKYTEKVAPRAVFTTGQGASAVGLTAYV 545
            .|.||||..|...|...:|||||:.:.|||.||||||||:.|:..||||:|:|:.:||.||||.|
Zfish   367 LLMLFGGVPKTTMEGTSLRGDINVCVVGDPSTAKSQFLKHVEEFCPRAVYTSGKASSAAGLTAAV 431

  Fly   546 RRNPVSREWTLEAGALVLADQGVCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTSLQARCT 610
            .|:..|.|:.:|||||:|||.|||.|||||||..:|:.:||||||||:|||:|||:..:|.||.:
Zfish   432 VRDEESHEFVIEAGALMLADNGVCCIDEFDKMETRDQVAIHEAMEQQTISITKAGVKATLNARTS 496

  Fly   611 VIAAANPIGGRYDPSMTFSENVNLSEPILSRFDVLCVVKDEFDPMQDQQLAKFVVHSHMKHHPSE 675
            ::|||||:.||||.|.:..:||||:.||:||||:..::.|:.:.:.|..:|:.:|..|.:...|.
Zfish   497 ILAAANPVSGRYDRSKSLKQNVNLTAPIMSRFDLFFILVDDCNEVTDYAIARRIVDLHSRIENSV 561

  Fly   676 EEQPELEEPQLKTVDEIPQDLLRQYIVYAKENIRPKLTNIDEDKIAKMYAQLRQE--SFATGSL- 737
            :....|:|             :|:|:::|:: .:||::...|:.|.:.|.:|||.  |..|.|. 
Zfish   562 DRVYSLDE-------------IRRYLLFARQ-FKPKISKESEEFIVEQYKRLRQRDGSGVTKSAW 612

  Fly   738 PITVRHIESVIRMSEAHARMHLRENVMEADVSMAIRMMLESFIEAQKFSV--------------- 787
            .||||.:||:||:||:.||||..:.|....|..|.|::.:|.|..:...|               
Zfish   613 RITVRQLESLIRLSESMARMHCCDEVQPKHVKEAFRLLNKSIIRVETPDVNLDQEEEEAMEEEED 677

  Fly   788 ---------------------------------------MKKMRSTFQKYLSFQKDHSELLFFIL 813
                                                   ...:|.:|.:|    |..|.||...|
Zfish   678 NQMNGHDVPNGVNGAVNGEVNGHEHTNGINGHGVNGETAKPSLRLSFAEY----KRISNLLVLHL 738

  Fly   814 RQLTLDQLAYIRCKDGPGATHVEIMERDLIERAKQLD----IVNLKPFYESDLFRTNGFSYDPKR 874
            |:...|:       |.......|::...|.|...::|    :::.|...|..::|...:.|    
Zfish   739 RRAEEDE-------DEAALKKSEVVNWYLKEIESEIDSEMELISKKTMIEKVIYRLVHYDY---- 792

  Fly   875 RIILQIVVDG 884
             |::::...|
Zfish   793 -ILIELKQSG 801

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm2NP_477121.1 MCM2_N 59..166 CDD:372227 6/26 (23%)
MCM_N 184..270 CDD:379644 19/87 (22%)
MCM 276..780 CDD:214631 192/552 (35%)
mcm6NP_001076318.1 MCM_N 27..137 CDD:291233 26/137 (19%)
MCM 117..655 CDD:214631 192/553 (35%)
P-loop_NTPase <445..532 CDD:304359 54/86 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1241
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D232729at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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