DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm2 and MCM6

DIOPT Version :9

Sequence 1:NP_477121.1 Gene:Mcm2 / 40973 FlyBaseID:FBgn0014861 Length:887 Species:Drosophila melanogaster
Sequence 2:NP_005906.2 Gene:MCM6 / 4175 HGNCID:6949 Length:821 Species:Homo sapiens


Alignment Length:668 Identity:223/668 - (33%)
Similarity:353/668 - (52%) Gaps:87/668 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 RTEIANR----FQSFLRTFVDERGAYTYRDRIRRMCEQNMSSFVVSYTDLANKEHVLAYFLPEAP 237
            |.|:|.:    |..||..|....|...|......:.....::.|||:.||......|:..:.|..
Human    19 RDEVAEKCQKLFLDFLEEFQSSDGEIKYLQLAEELIRPERNTLVVSFVDLEQFNQQLSTTIQEEF 83

  Fly   238 FQM-------LEIFDKVAKDMVLSIFPTYERVTTEIHVRISELPLIEELRTFRKLHLNQLVRTLG 295
            :::       |:.|.|..|::.|:         .:.:|...:||...::|......:..|.|..|
Human    84 YRVYPYLCRALKTFVKDRKEIPLA---------KDFYVAFQDLPTRHKIRELTSSRIGLLTRISG 139

  Fly   296 VVTATTGVLPQLSVIKYDCVKCGYVLGPFVQSQNTEIKPGSC--PECQSTGPFSINMEQTLYRNY 358
            .|..|..|.|:|....:.|:.|..|:.. |:.|....:|..|  |.|.:...|.::..::.:.::
Human   140 QVVRTHPVHPELVSGTFLCLDCQTVIRD-VEQQFKYTQPNICRNPVCANRRRFLLDTNKSRFVDF 203

  Fly   359 QKITLQESPGRIPAGRIPRSKDVILLADLCDQCKPGDELEVTGIY-----------------TNN 406
            ||:.:||:...:|.|.||||.:|||.|:..:..:.||:.:.||..                 ||:
Human   204 QKVRIQETQAELPRGSIPRSLEVILRAEAVESAQAGDKCDFTGTLIVVPDVSKLSTPGARAETNS 268

  Fly   407 ----YDGSLNTD--QGFPVFATVIIANHVV-----------------VKDSKQVVQS----LTDE 444
                .|| ..|:  :|........::..:|                 ::|.:|..:|    :|.:
Human   269 RVSGVDG-YETEGIRGLRALGVRDLSYRLVFLACCVAPTNPRFGGKELRDEEQTAESIKNQMTVK 332

  Fly   445 DIATIQKLSKDPRIVERVVASMAPSIYGHDYIKRALALALFGGESKNPGEKHKVRGDINLLICGD 509
            :...:.::|:|..:...:..|:.|:|:|:|.:||.:.|.||||..|..||...:|||||:.|.||
Human   333 EWEKVFEMSQDKNLYHNLCTSLFPTIHGNDEVKRGVLLMLFGGVPKTTGEGTSLRGDINVCIVGD 397

  Fly   510 PGTAKSQFLKYTEKVAPRAVFTTGQGASAVGLTAYVRRNPVSREWTLEAGALVLADQGVCLIDEF 574
            |.||||||||:.|:.:||||:|:|:.:||.||||.|.|:..|.|:.:|||||:|||.|||.||||
Human   398 PSTAKSQFLKHVEEFSPRAVYTSGKASSAAGLTAAVVRDEESHEFVIEAGALMLADNGVCCIDEF 462

  Fly   575 DKMNDQDRTSIHEAMEQQSISISKAGIVTSLQARCTVIAAANPIGGRYDPSMTFSENVNLSEPIL 639
            |||:.:|:.:||||||||:|||:|||:..:|.||.:::||||||.|.||.|.:..:|:|||.||:
Human   463 DKMDVRDQVAIHEAMEQQTISITKAGVKATLNARTSILAAANPISGHYDRSKSLKQNINLSAPIM 527

  Fly   640 SRFDVLCVVKDEFDPMQDQQLAKFVVHSHMKHHPSEEEQPELEEPQLKTVDEI-PQDLLRQYIVY 703
            ||||:..::.||.:.:.|..:|:.:|..|.:          :||    ::|.: ..|.:|:|:::
Human   528 SRFDLFFILVDECNEVTDYAIARRIVDLHSR----------IEE----SIDRVYSLDDIRRYLLF 578

  Fly   704 AKENIRPKLTNIDEDKIAKMYAQLRQ---ESFATGSLPITVRHIESVIRMSEAHARMHLRENVME 765
            |:: .:||::...||.|.:.|..|||   ......|..||||.:||:||:|||.||||..:.|..
Human   579 ARQ-FKPKISKESEDFIVEQYKHLRQRDGSGVTKSSWRITVRQLESMIRLSEAMARMHCCDEVQP 642

  Fly   766 ADVSMAIRMMLESFIEAQ 783
            ..|..|.|::.:|.|..:
Human   643 KHVKEAFRLLNKSIIRVE 660

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm2NP_477121.1 MCM2_N 59..166 CDD:372227
MCM_N 184..270 CDD:379644 19/92 (21%)
MCM 276..780 CDD:214631 198/553 (36%)
MCM6NP_005906.2 MCM_N 27..114 CDD:405270 19/95 (20%)
MCM 119..657 CDD:214631 198/554 (36%)
Arginine finger 528..531 2/2 (100%)
MCM6_C 713..817 CDD:408078
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1241
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D232729at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

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