DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm2 and mcm7

DIOPT Version :9

Sequence 1:NP_477121.1 Gene:Mcm2 / 40973 FlyBaseID:FBgn0014861 Length:887 Species:Drosophila melanogaster
Sequence 2:NP_998877.1 Gene:mcm7 / 407945 XenbaseID:XB-GENE-5946446 Length:720 Species:Xenopus tropicalis


Alignment Length:723 Identity:232/723 - (32%)
Similarity:369/723 - (51%) Gaps:111/723 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   185 QSFLRTFV--DERGA--YTYRDRIRRMCEQNMSSFVVSYTDLANKEHVLAYFLPEAPFQMLEIFD 245
            ::||:.|.  ||.|.  :.|..::..:..:...:..:...|||.::..|...:.|...:...:| 
 Frog    13 KTFLQEFYKDDELGKKNFKYGVQLANIAHREQVALYIDLDDLAEEDPELVDAICENTRRYTNLF- 76

  Fly   246 KVAKDMVLSIFPTYER---------------------------VTTEIH-------VRISEL--- 273
               .|.|..:.|.|:.                           .|.:.|       :|..||   
 Frog    77 ---ADAVQELLPQYKEREVVHKDALDVYIEHRLMMEQRGRDPSETRDPHNQYPPELMRRFELYFK 138

  Fly   274 -PLIEELRTFRKL---HLNQLVRTLGVVTATTGVLPQLSVIKYDCVKCGYVLGPFVQSQNTEIKP 334
             |...:.|..|.:   .:.:||...|:||..|.|.|.:.|..|.|.:||......:||. |.:..
 Frog   139 APSSSKARVVRDVKADSIGKLVTVRGIVTRVTEVKPMMVVATYTCDQCGAETYQPIQSP-TFMPL 202

  Fly   335 GSCP--ECQ---STGPFSINMEQTLYRNYQKITLQESPGRIPAGRIPRSKDVILLADLCDQCKPG 394
            ..||  |||   |.|...:....:.:..:|::.:||...::|.|.|||...|.:..:.....:||
 Frog   203 IMCPSRECQTNRSGGRLYLQTRGSKFIKFQELKIQEHSDQVPVGNIPRCMSVYVRGENTRLAQPG 267

  Fly   395 DELEVTGIYTNNY-DGSLNTDQGFPVFATVIIANHVVVK-----DSKQVVQSLTDEDIATIQKLS 453
            |.:.:||::.... .|.....||  :.:...:.:|.:||     |.:...:.|::|::..|    
 Frog   268 DHVSITGVFLPMLRTGFRQVVQG--LLSETYLESHRLVKMNKTEDDELGTEELSEEELRQI---- 326

  Fly   454 KDPRIVERVVASMAPSIYGHDYIKRALALALFGGESKNPGEKHKVRGDINLLICGDPGTAKSQFL 518
            .:....|::.||:||.||||:.:|:||.|.|.||...:| ...|:||:||:.:.||||.||||.|
 Frog   327 TEEDFYEKLAASIAPEIYGHEDVKKALLLLLVGGVDNSP-RGMKIRGNINICLMGDPGVAKSQLL 390

  Fly   519 KYTEKVAPRAVFTTGQGASAVGLTAYVRRNPVSREWTLEAGALVLADQGVCLIDEFDKMNDQDRT 583
            .|.:::|||:.:|||:|:|.|||||.|.::||:.|.|||.|||||||||||.|||||||.|.|||
 Frog   391 SYIDRLAPRSQYTTGRGSSGVGLTAAVMKDPVTGEMTLEGGALVLADQGVCCIDEFDKMMDTDRT 455

  Fly   584 SIHEAMEQQSISISKAGIVTSLQARCTVIAAANPIGGRYDPSMTFSENVNLSEPILSRFDVLCVV 648
            :|||.||||:|||:||||:|:|.|||:::|||||..|||:|..|..:|:.|...:|||||:|.::
 Frog   456 AIHEVMEQQTISIAKAGIMTTLNARCSILAAANPAYGRYNPKKTVEQNIQLPAALLSRFDLLWLI 520

  Fly   649 KDEFDPMQDQQLAKFV--VHSHMKHHPSEEEQPELEEPQLKTVDEIPQDLLRQYIVYAKENIRPK 711
            :|:.|...|.:||:.:  ||.|.|..||:.:..:::             |:|:||...|.. :|.
 Frog   521 QDKPDRDNDLRLAQHITYVHQHSKQPPSQFQPLDMK-------------LMRRYITMCKRK-QPA 571

  Fly   712 LTNIDEDKIAKMYAQLRQESFATGSLPIT-VRHIESVIRMSEAHARMHLRENVMEADVSMAIRMM 775
            :.....|.:...|.::|:|:.....:..| .|.:.|::|:|.|.||:.|.:.|.:.||:.|:|: 
 Frog   572 IPESLADYLTAAYVEMRKEARTNKDMTFTSARTLLSILRLSTALARLRLEDVVEKEDVNEAMRL- 635

  Fly   776 LESFIEAQKFSVM--KKMRSTFQKYLSFQKDHSELLFFILRQLTLDQLAYIRCKDGPGATHVEIM 838
                .|..|.|::  |...|..|:       .::::|..:|::..::          ||..|:..
 Frog   636 ----TEMSKDSLLGDKGQTSRTQR-------PADVIFSTIREMVPEK----------GARSVKYS 679

  Fly   839 ERDLIERA 846
            |.:  :||
 Frog   680 EAE--QRA 685

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm2NP_477121.1 MCM2_N 59..166 CDD:372227
MCM_N 184..270 CDD:379644 19/122 (16%)
MCM 276..780 CDD:214631 195/520 (38%)
mcm7NP_998877.1 MCM_N 13..96 CDD:379644 17/86 (20%)
MCM 144..640 CDD:214631 196/522 (38%)
Arginine finger 512..515 2/2 (100%)
PRC2_HTH_1 <621..672 CDD:375567 13/72 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D266497at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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