DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm2 and Mcm6

DIOPT Version :9

Sequence 1:NP_477121.1 Gene:Mcm2 / 40973 FlyBaseID:FBgn0014861 Length:887 Species:Drosophila melanogaster
Sequence 2:NP_511065.1 Gene:Mcm6 / 31603 FlyBaseID:FBgn0025815 Length:817 Species:Drosophila melanogaster


Alignment Length:682 Identity:220/682 - (32%)
Similarity:343/682 - (50%) Gaps:104/682 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 VSMLGPRTEIANR----FQSFLRTFVDERGAYTYRDRIRRMCEQNMSSFVVSYTDLANKEHVLAY 231
            |..|..:.|:..|    ||.||..| .|.|...|......:...:..:..||:.|:...:..||.
  Fly     8 VGQLRVKDEVGIRAQKLFQDFLEEF-KEDGEIKYTRPAASLESPDRCTLEVSFEDVEKYDQNLAT 71

  Fly   232 FLPEA-----PFQMLEIFDKVAKDMVLSIFPTYERVTTEIHVRISELPLIEELRTFRKLHLNQLV 291
            .:.|.     ||....:.:.|...:.|       :...:.:|..:|:|...::|......:..|:
  Fly    72 AIIEEYYHIYPFLCQSVSNYVKDRIGL-------KTQKDCYVAFTEVPTRHKVRDLTTSKIGTLI 129

  Fly   292 RTLGVVTATTGVLPQLSVIKYDCVKCGYVLGPFVQSQNTEIK----------PGSC--PECQSTG 344
            |..|.|..|..|.|:|....:.|:.|           .|||:          |..|  |.|.:..
  Fly   130 RISGQVVRTHPVHPELVSGVFMCLDC-----------QTEIRNVEQQFKFTNPTICRNPVCSNRK 183

  Fly   345 PFSINMEQTLYRNYQKITLQESPGRIPAGRIPRSKDVILLADLCDQCKPGDELEVTGIYT----- 404
            .|.:::|::|:.::|||.:||:...:|.|.|||:.::||.::|.:..:.||..:.||...     
  Fly   184 RFMLDVEKSLFLDFQKIRIQETQAELPRGCIPRAVEIILRSELVETVQAGDRYDFTGTLIVVPDV 248

  Fly   405 -------------------NNYDG----------SLNTDQGF---PVFATV-------IIANHVV 430
                               ...||          .||....|   .|.||.       :..:.|.
  Fly   249 SVLAGVGTRAENSSRHKPGEGMDGVTGLKALGMRELNYRMAFLACSVQATTARFGGTDLPMSEVT 313

  Fly   431 VKDSKQVVQSLTDEDIATIQKLSKDPRIVERVVASMAPSIYGHDYIKRALALALFGGESKNPGEK 495
            .:|.|   :.:||.:...|.::|||..:.:.:::|:.|||||:|.:||.:.|..|||.:|...||
  Fly   314 AEDMK---KQMTDAEWHKIYEMSKDRNLYQNLISSLFPSIYGNDEVKRGILLQQFGGVAKTTTEK 375

  Fly   496 HKVRGDINLLICGDPGTAKSQFLKYTEKVAPRAVFTTGQGASAVGLTAYVRRNPVSREWTLEAGA 560
            ..:|||||:.|.|||.||||||||.....:|||::|:|:.:||.||||.|.|:..|.::.:||||
  Fly   376 TSLRGDINVCIVGDPSTAKSQFLKQVSDFSPRAIYTSGKASSAAGLTAAVVRDEESFDFVIEAGA 440

  Fly   561 LVLADQGVCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTSLQARCTVIAAANPIGGRYDPS 625
            |:|||.|:|.|||||||:.:|:.:||||||||:|||::||:..:|.||.:::||||||.||||.|
  Fly   441 LMLADNGICCIDEFDKMDQRDQVAIHEAMEQQTISIARAGVRATLNARTSILAAANPINGRYDRS 505

  Fly   626 MTFSENVNLSEPILSRFDVLCVVKDEFDPMQDQQLAKFVVHSHMKHHPSEEEQPELEEPQLKTVD 690
            .:..:|:.||.||:||||:..::.||.:.:.|..:|:.:|..|.....|.|.....||       
  Fly   506 KSLQQNIQLSAPIMSRFDLFFILVDECNEVVDYAIARKIVDLHSNIEESVERAYTREE------- 563

  Fly   691 EIPQDLLRQYIVYAKENIRPKLTNIDEDKIAKMYAQLRQESFAT---GSLPITVRHIESVIRMSE 752
                 :|| |:.:|:: .:|.::......:.:.|..|||....|   .:..||||.:||:||:||
  Fly   564 -----VLR-YVTFARQ-FKPVISQEAGHMLVENYGHLRQRDTGTSGRSTWRITVRQLESMIRLSE 621

  Fly   753 AHARMHLRENVMEADVSMAIRMMLESFIEAQK 784
            |.|::.....|:|..|..|.|::.:|.|..::
  Fly   622 AMAKLECSNRVLERHVKEAFRLLNKSIIRVEQ 653

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm2NP_477121.1 MCM2_N 59..166 CDD:372227
MCM_N 184..270 CDD:379644 19/90 (21%)
MCM 276..780 CDD:214631 194/562 (35%)
Mcm6NP_511065.1 MCM_N 25..109 CDD:379644 19/91 (21%)
MCM 113..649 CDD:214631 194/563 (34%)
MCM6_C 702..816 CDD:375690
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45469741
Domainoid 1 1.000 52 1.000 Domainoid score I661
eggNOG 1 0.900 - - E1_COG1241
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D15169at50557
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11630
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.850

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