DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm2 and mcm-2

DIOPT Version :9

Sequence 1:NP_477121.1 Gene:Mcm2 / 40973 FlyBaseID:FBgn0014861 Length:887 Species:Drosophila melanogaster
Sequence 2:NP_001022416.1 Gene:mcm-2 / 174841 WormBaseID:WBGene00003154 Length:881 Species:Caenorhabditis elegans


Alignment Length:897 Identity:487/897 - (54%)
Similarity:633/897 - (70%) Gaps:58/897 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 DAAERRDLRAAMTSPVGD---------FEPFENEDEILGDQTVRDEAEEEDGEELFGDNMENDYR 69
            |..:|:.|      |:.|         .|.|.||||         :.|:|:||.||||:||.|||
 Worm     9 DDVDRQPL------PIADDADDDVDGIDEMFNNEDE---------DPEDEEGENLFGDDMERDYR 58

  Fly    70 PMPELDHYDPALLDDEDDFSEMSQGDRFAAESEMRRRDRAAGIHRDDRDLGFGQSDDED-DVGPR 133
            ..||||.|..:.:||..|...:|...|.|||.||.:||:..    ||..|.:...|.|: |...|
 Worm    59 EQPELDQYSESGMDDASDVGSLSVSARRAAEREMAQRDQLL----DDDALMYEDGDSEEVDTRRR 119

  Fly   134 AKRRAGEKAAVGEVEDTEMVE------SIENLEDTKGHSTKEWVSMLGPRTEIANRFQSFLRTFV 192
            .:.|.|.    |:..|.:.|.      .::.||:.:|.:.::.||......||..||::|||:|.
 Worm   120 GRGRRGR----GDAADDDSVPMEEEDIPVDILENIRGRTIRDHVSDEAVAKEIERRFKNFLRSFH 180

  Fly   193 DERGAYT-YRDRIRRMCEQNMSSFVVSYTDLA--NKEHVLAYFLPEAPFQMLEIFDKVAKDMVLS 254
            :.....| |...|:.|...|..|..||:|||:  |.|..::|||||||.:||.|.|:.|.::|::
 Worm   181 EPGNKQTKYIQMIKSMAADNRESLEVSFTDLSDDNGEQNISYFLPEAPNEMLAIMDRAATEVVMN 245

  Fly   255 IFPTYERVTTEIHVRISELPLIEELRTFRKLHLNQLVRTLGVVTATTGVLPQLSVIKYDCVKCGY 319
            ::|.|.||..||.||||:||:.|::|..|::|||.|:||.||||..:|:||||:|:|||||.|||
 Worm   246 MYPFYSRVCNEIKVRISQLPVEEDIRMLRQVHLNMLIRTAGVVTIASGILPQLAVVKYDCVACGY 310

  Fly   320 VLGPFVQSQNTEIKPGSCPECQSTGPFSINMEQTLYRNYQKITLQESPGRIPAGRIPRSKDVILL 384
            :||||||..:.|::|..||.||..|||.:|:|.|:|.|||:||:||||.::.|||:|||||||||
 Worm   311 LLGPFVQQNDEEVRPTICPSCQGKGPFELNVENTVYHNYQRITMQESPNKVAAGRLPRSKDVILL 375

  Fly   385 ADLCDQCKPGDELEVTGIYTNNYDGSLNTDQGFPVFATVIIANHVVVKDSKQVVQSLTDEDIATI 449
            .||||.||||||:||||:||||:|||||..||||||.|:|.|||:..|| |.....||||||..|
 Worm   376 GDLCDSCKPGDEIEVTGVYTNNFDGSLNYKQGFPVFNTLIHANHITNKD-KMASDQLTDEDIKAI 439

  Fly   450 QKLSKDPRIVERVVASMAPSIYGHDYIKRALALALFGGESKNPGEKHKVRGDINLLICGDPGTAK 514
            ::||:||.|.:||.:|:||||||||.:|||:|||||.||:||||.||::|||||:|:||||||||
 Worm   440 RELSQDPNISQRVFSSIAPSIYGHDDVKRAIALALFRGEAKNPGAKHRLRGDINVLLCGDPGTAK 504

  Fly   515 SQFLKYTEKVAPRAVFTTGQGASAVGLTAYVRRNPVSREWTLEAGALVLADQGVCLIDEFDKMND 579
            ||||:|...:|||:|.|||||||||||||||:|:||:|||||||||:||||:|||||||||||:|
 Worm   505 SQFLRYAAHIAPRSVLTTGQGASAVGLTAYVQRHPVTREWTLEAGAMVLADKGVCLIDEFDKMSD 569

  Fly   580 QDRTSIHEAMEQQSISISKAGIVTSLQARCTVIAAANPIGGRYDPSMTFSENVNLSEPILSRFDV 644
            ||||||||||||||||||||||||||.||||||||:|||||||:|:.||:|||:|:|||||||||
 Worm   570 QDRTSIHEAMEQQSISISKAGIVTSLHARCTVIAASNPIGGRYNPTRTFAENVDLTEPILSRFDV 634

  Fly   645 LCVVKDEFDPMQDQQLAKFVVHSHMKHHPSE----EEQPELEEPQLKTVDE------IPQDLLRQ 699
            |||::|..|.::|::||||||.:|..|||..    :|..||||.|:   ||      |||||||:
 Worm   635 LCVIRDSVDSVEDERLAKFVVGNHRTHHPDAKKIVKEGDELEEDQM---DERTGVRLIPQDLLRK 696

  Fly   700 YIVYAKENIRPKLTNIDEDKIAKMYAQLRQESFATGSLPITVRHIESVIRMSEAHARMHLRENVM 764
            ||:||:|...|.|.....:|.:.::||:|:||.||||:.|||||:||:||:|||||::|||..|.
 Worm   697 YIIYAREKCHPTLPEQHSEKFSNIFAQMRKESMATGSVAITVRHVESMIRLSEAHAKLHLRSYVN 761

  Fly   765 EADVSMAIRMMLESFIEAQKFSVMKKMRSTFQKYLSFQKDHSELLFFILRQLTLDQLAYIRCKDG 829
            :.|.:.|||:|||||:..||.|:|:.|:.||.::|:..:..:|||.|||:||...|:.|...:..
 Worm   762 DEDCAAAIRVMLESFVNTQKASIMRMMKKTFSRHLTENRSANELLLFILKQLIRQQMHYATARAA 826

  Fly   830 PGA--THVEIMERDLIERAKQLDIVNLKPFYESDLFRTNGFSYDPKRRIILQ 879
            .|.  ..|.|.|.:.||:|:||.|.|:||||.|::|.:|.|.|||.::.|:|
 Worm   827 AGTILQSVTIPESEFIEKAQQLRIENVKPFYTSEIFASNNFLYDPSKKTIVQ 878

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm2NP_477121.1 MCM2_N 59..166 CDD:372227 41/113 (36%)
MCM_N 184..270 CDD:379644 38/88 (43%)
MCM 276..780 CDD:214631 340/513 (66%)
mcm-2NP_001022416.1 MCM2_N 48..>103 CDD:289392 28/58 (48%)
MCM_N 171..286 CDD:291233 53/114 (46%)
MCM 270..777 CDD:214631 339/510 (66%)
AAA 461..639 CDD:99707 146/177 (82%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167031
Domainoid 1 1.000 355 1.000 Domainoid score I517
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3325
Inparanoid 1 1.050 931 1.000 Inparanoid score I176
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54431
OrthoDB 1 1.010 - - D232729at33208
OrthoFinder 1 1.000 - - FOG0004149
OrthoInspector 1 1.000 - - oto20656
orthoMCL 1 0.900 - - OOG6_101336
Panther 1 1.100 - - LDO PTHR11630
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R692
SonicParanoid 1 1.000 - - X3415
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.940

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