DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mcm2 and mcm-2

DIOPT Version :10

Sequence 1:NP_477121.1 Gene:Mcm2 / 40973 FlyBaseID:FBgn0014861 Length:887 Species:Drosophila melanogaster
Sequence 2:NP_001022416.1 Gene:mcm-2 / 174841 WormBaseID:WBGene00003154 Length:881 Species:Caenorhabditis elegans


Alignment Length:897 Identity:487/897 - (54%)
Similarity:633/897 - (70%) Gaps:58/897 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 DAAERRDLRAAMTSPVGD---------FEPFENEDEILGDQTVRDEAEEEDGEELFGDNMENDYR 69
            |..:|:.|      |:.|         .|.|.||||         :.|:|:||.||||:||.|||
 Worm     9 DDVDRQPL------PIADDADDDVDGIDEMFNNEDE---------DPEDEEGENLFGDDMERDYR 58

  Fly    70 PMPELDHYDPALLDDEDDFSEMSQGDRFAAESEMRRRDRAAGIHRDDRDLGFGQSDDED-DVGPR 133
            ..||||.|..:.:||..|...:|...|.|||.||.:||:..    ||..|.:...|.|: |...|
 Worm    59 EQPELDQYSESGMDDASDVGSLSVSARRAAEREMAQRDQLL----DDDALMYEDGDSEEVDTRRR 119

  Fly   134 AKRRAGEKAAVGEVEDTEMVE------SIENLEDTKGHSTKEWVSMLGPRTEIANRFQSFLRTFV 192
            .:.|.|.    |:..|.:.|.      .::.||:.:|.:.::.||......||..||::|||:|.
 Worm   120 GRGRRGR----GDAADDDSVPMEEEDIPVDILENIRGRTIRDHVSDEAVAKEIERRFKNFLRSFH 180

  Fly   193 DERGAYT-YRDRIRRMCEQNMSSFVVSYTDLA--NKEHVLAYFLPEAPFQMLEIFDKVAKDMVLS 254
            :.....| |...|:.|...|..|..||:|||:  |.|..::|||||||.:||.|.|:.|.::|::
 Worm   181 EPGNKQTKYIQMIKSMAADNRESLEVSFTDLSDDNGEQNISYFLPEAPNEMLAIMDRAATEVVMN 245

  Fly   255 IFPTYERVTTEIHVRISELPLIEELRTFRKLHLNQLVRTLGVVTATTGVLPQLSVIKYDCVKCGY 319
            ::|.|.||..||.||||:||:.|::|..|::|||.|:||.||||..:|:||||:|:|||||.|||
 Worm   246 MYPFYSRVCNEIKVRISQLPVEEDIRMLRQVHLNMLIRTAGVVTIASGILPQLAVVKYDCVACGY 310

  Fly   320 VLGPFVQSQNTEIKPGSCPECQSTGPFSINMEQTLYRNYQKITLQESPGRIPAGRIPRSKDVILL 384
            :||||||..:.|::|..||.||..|||.:|:|.|:|.|||:||:||||.::.|||:|||||||||
 Worm   311 LLGPFVQQNDEEVRPTICPSCQGKGPFELNVENTVYHNYQRITMQESPNKVAAGRLPRSKDVILL 375

  Fly   385 ADLCDQCKPGDELEVTGIYTNNYDGSLNTDQGFPVFATVIIANHVVVKDSKQVVQSLTDEDIATI 449
            .||||.||||||:||||:||||:|||||..||||||.|:|.|||:..|| |.....||||||..|
 Worm   376 GDLCDSCKPGDEIEVTGVYTNNFDGSLNYKQGFPVFNTLIHANHITNKD-KMASDQLTDEDIKAI 439

  Fly   450 QKLSKDPRIVERVVASMAPSIYGHDYIKRALALALFGGESKNPGEKHKVRGDINLLICGDPGTAK 514
            ::||:||.|.:||.:|:||||||||.:|||:|||||.||:||||.||::|||||:|:||||||||
 Worm   440 RELSQDPNISQRVFSSIAPSIYGHDDVKRAIALALFRGEAKNPGAKHRLRGDINVLLCGDPGTAK 504

  Fly   515 SQFLKYTEKVAPRAVFTTGQGASAVGLTAYVRRNPVSREWTLEAGALVLADQGVCLIDEFDKMND 579
            ||||:|...:|||:|.|||||||||||||||:|:||:|||||||||:||||:|||||||||||:|
 Worm   505 SQFLRYAAHIAPRSVLTTGQGASAVGLTAYVQRHPVTREWTLEAGAMVLADKGVCLIDEFDKMSD 569

  Fly   580 QDRTSIHEAMEQQSISISKAGIVTSLQARCTVIAAANPIGGRYDPSMTFSENVNLSEPILSRFDV 644
            ||||||||||||||||||||||||||.||||||||:|||||||:|:.||:|||:|:|||||||||
 Worm   570 QDRTSIHEAMEQQSISISKAGIVTSLHARCTVIAASNPIGGRYNPTRTFAENVDLTEPILSRFDV 634

  Fly   645 LCVVKDEFDPMQDQQLAKFVVHSHMKHHPSE----EEQPELEEPQLKTVDE------IPQDLLRQ 699
            |||::|..|.::|::||||||.:|..|||..    :|..||||.|:   ||      |||||||:
 Worm   635 LCVIRDSVDSVEDERLAKFVVGNHRTHHPDAKKIVKEGDELEEDQM---DERTGVRLIPQDLLRK 696

  Fly   700 YIVYAKENIRPKLTNIDEDKIAKMYAQLRQESFATGSLPITVRHIESVIRMSEAHARMHLRENVM 764
            ||:||:|...|.|.....:|.:.::||:|:||.||||:.|||||:||:||:|||||::|||..|.
 Worm   697 YIIYAREKCHPTLPEQHSEKFSNIFAQMRKESMATGSVAITVRHVESMIRLSEAHAKLHLRSYVN 761

  Fly   765 EADVSMAIRMMLESFIEAQKFSVMKKMRSTFQKYLSFQKDHSELLFFILRQLTLDQLAYIRCKDG 829
            :.|.:.|||:|||||:..||.|:|:.|:.||.::|:..:..:|||.|||:||...|:.|...:..
 Worm   762 DEDCAAAIRVMLESFVNTQKASIMRMMKKTFSRHLTENRSANELLLFILKQLIRQQMHYATARAA 826

  Fly   830 PGA--THVEIMERDLIERAKQLDIVNLKPFYESDLFRTNGFSYDPKRRIILQ 879
            .|.  ..|.|.|.:.||:|:||.|.|:||||.|::|.:|.|.|||.::.|:|
 Worm   827 AGTILQSVTIPESEFIEKAQQLRIENVKPFYTSEIFASNNFLYDPSKKTIVQ 878

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm2NP_477121.1 MCM2_N 59..166 CDD:403724 41/113 (36%)
MCM_N 182..271 CDD:464206 40/91 (44%)
MCM 276..780 CDD:214631 340/513 (66%)
mcm-2NP_001022416.1 MCM2_N 48..>116 CDD:403724 31/71 (44%)
MCM_N 169..262 CDD:464206 40/92 (43%)
MCM 270..777 CDD:214631 339/510 (66%)

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