DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm2 and Mcm3

DIOPT Version :10

Sequence 1:NP_477121.1 Gene:Mcm2 / 40973 FlyBaseID:FBgn0014861 Length:887 Species:Drosophila melanogaster
Sequence 2:XP_322026.3 Gene:Mcm3 / 1282031 VectorBaseID:AGAMI1_000046 Length:819 Species:Anopheles gambiae


Alignment Length:681 Identity:234/681 - (34%)
Similarity:352/681 - (51%) Gaps:95/681 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   180 IANRFQSFLRTFVDERGAYTYRDRIRRMCEQNMSSFVVSYTDLANKEHVLAYFLPEAPFQMLEIF 244
            |.|.:.:||.   ||....||...:|:|........||:..|:..|....|..|..:.|.....|
Mosquito    11 IQNEYLNFLD---DEEDQGTYTAHVRKMINDKSKRLVVNINDIRRKNPGRALALLNSAFDEQLAF 72

  Fly   245 DKVAKDMVLSIFPTYERVTTEIHVRISELPLIEELRTFRKLHL---NQLVRTLGVVTATTGVLPQ 306
            .:..||.|.:|..:|.:...:.||...        .:|...|:   :...|.||.:....|::.:
Mosquito    73 SRALKDYVSTIDMSYAKTQEDFHVAFE--------GSFGNKHVTPRSLTSRFLGNLVCVEGIVTK 129

  Fly   307 LSVIKYDCVKCGYVLGP--------FVQSQNTEIKPGSC--PECQSTGPFSINMEQT-----LYR 356
            :|:|:...||..:....        :....:.|..|.|.  |.....|    |:.:|     :|:
Mosquito   130 VSLIRPKVVKSVHYCPATKKVMERRYTDLTSFEAVPSSAVYPTKDDDG----NLLETEFGLSVYK 190

  Fly   357 NYQKITLQESPGRIPAGRIPRSKDVILLADLCDQCKPGDELEVTGIYTNNY------DGSLNTDQ 415
            ::|.:::||.|.:.|||::|||.||:...||.|:|||||.:::.|    ||      .|...|. 
Mosquito   191 DHQTLSIQEMPEKAPAGQLPRSVDVVCDDDLVDRCKPGDRVQIVG----NYRCLPGKQGGYTTG- 250

  Fly   416 GFPVFATVIIANHVVVKDSKQVVQSLTDEDIATIQKLSKDPRIVERVVASMAPSIYGHDYIKRAL 480
               .|.|::|||: :.:.:|:...|:|.|:|...:||:|:..|.:.:..|:||||:||:|:|:|:
Mosquito   251 ---TFRTILIANN-ISQLNKESTLSVTREEINMCKKLAKNNDIFDLLAKSLAPSIHGHEYVKKAI 311

  Fly   481 ALALFGGESKNPGEKHKVRGDINLLICGDPGTAKSQFLKYTEKVAPRAVFTTGQGASAVGLTAYV 545
            ...|.||..||.....::|||:|:|:.|||..||||.|:|....||||:.|||:|:|.|||||.|
Mosquito   312 LCLLLGGIEKNLANGTRLRGDVNVLLIGDPSVAKSQLLRYVLNTAPRAITTTGRGSSGVGLTAAV 376

  Fly   546 RRNPVSREWTLEAGALVLADQGVCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTSLQARCT 610
            ..:..:.|..|||||:||||:||..|||||||:|.|||:|||.|||..::||||||..||.|||:
Mosquito   377 TTDQETGERRLEAGAMVLADRGVVCIDEFDKMSDIDRTAIHEVMEQGRVTISKAGIHASLNARCS 441

  Fly   611 VIAAANPIGGRYDPSMTFSENVNLSEPILSRFDVLCVVKDEFDPMQDQQLAKFVVHSHMKHHPSE 675
            |:|||||:.||||...|..||:.|.:.:|||||:|.|:.|..|...|:.::..||..|...:|.|
Mosquito   442 VLAAANPVYGRYDQYKTPMENIGLQDSLLSRFDLLFVMLDVIDSDHDRMISDHVVRMHRYRNPKE 506

  Fly   676 EE---------------------------------QPELEEPQLKTVDEI-PQDLLRQYIVYAKE 706
            ::                                 .|.|.....|..|:| ..:.:|:||..|| 
Mosquito   507 QDGDVLPMGVSAVDMLSTINPDTLEDKETPMYEKYDPLLHGASRKRTDQILSMEFMRKYIHIAK- 570

  Fly   707 NIRPKLTNIDEDKIAKMYAQLRQESFATGSL----PITVRHIESVIRMSEAHARMHLRENVMEAD 767
            .::||||....:.|:..|::||.:......:    |:|.|.:|::||:|.|||:..:..:|.|.|
Mosquito   571 CLKPKLTETACEMISNEYSRLRSQDLMDSDVARTQPVTARTLETLIRLSTAHAKARMSRSVAEQD 635

  Fly   768 VSMAIRMM----LESFIEAQKFSVMKKMRST 794
            ...||.::    .:..:|.:|    ||.|.|
Mosquito   636 AQAAIELIQFAYFKKVLEKEK----KKRRRT 662

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm2NP_477121.1 MCM2_N 59..166 CDD:403724
MCM_N 182..271 CDD:464206 24/88 (27%)
MCM 276..780 CDD:214631 203/569 (36%)
Mcm3XP_322026.3 None
Blue background indicates that the domain is not in the aligned region.

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