DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mcm2 and Mcm5

DIOPT Version :10

Sequence 1:NP_477121.1 Gene:Mcm2 / 40973 FlyBaseID:FBgn0014861 Length:887 Species:Drosophila melanogaster
Sequence 2:XP_313694.2 Gene:Mcm5 / 1274553 VectorBaseID:AGAMI1_005670 Length:733 Species:Anopheles gambiae


Alignment Length:640 Identity:231/640 - (36%)
Similarity:344/640 - (53%) Gaps:57/640 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   180 IANRFQSFLRTFVDERGAYTYRDRIRRMCEQNMSSFVVSYTDLANKEHVLAYFLPEAPFQMLEIF 244
            :..:::.|:|||.:...:|.|||.::|..........|...|||..:..||..|.:.|.:.|:||
Mosquito    31 VKKQYREFIRTFCEANFSYKYRDTLKRNYLLGRYYLEVEIEDLAGFDESLADKLYKQPTENLQIF 95

  Fly   245 DKVAK---DMVLSIFPTYERVTTEIHVRISELPLIEELRTFRKLHLNQLVRTLGVVTATTGVLPQ 306
            ::.|:   |.:.|..|..|.|..:|.|.:........:|..:...:::||:..|::.|.:|:..:
Mosquito    96 EEAAREVADEITSPRPEGEEVVHDIQVLLVSGANPTNIRDLKSDCVSKLVKVAGIIIAASGIKAK 160

  Fly   307 LSVIKYDCVKCGYVLGPFVQSQNTEIKPG--------SC-------PECQSTGPFSINMEQTLYR 356
            .:.|...|..|..|:      .|..:.||        .|       |:| ...|:.|..::....
Mosquito   161 ATRISIQCRTCNNVI------PNLPVNPGLEGYQLPRKCNTEQAGRPKC-PLDPYFIMPDKCRCV 218

  Fly   357 NYQKITLQESPGRIPAGRIPRSKDVILLADLCDQCKPGDELEVTGIYT-------NNYDGSLNTD 414
            ::|.:.|||.|..||.|.|||...:.....||::..||:.:.:.||::       ...||.....
Mosquito   219 DFQVLKLQELPDFIPQGEIPRHMQLFCDRSLCERVVPGNRVLIHGIFSIRKIARQGKRDGRDKAI 283

  Fly   415 QGF--PVFATVIIANHVVVKDSKQVVQSLTDEDIATIQKLSKDPRIVERVVASMAPSIYGHDYIK 477
            .|.  |....|.|........:.....::|.|:.:|.:||:.:|.|.:.:..|:||||:|...||
Mosquito   284 IGVRAPYMRVVGITVDTEGMGAISRFNNITSEEESTFRKLAANPNIYDTLADSLAPSIFGSQDIK 348

  Fly   478 RALALALFGGESKNPGEKHKVRGDINLLICGDPGTAKSQFLKYTEKVAPRAVFTTGQGASAVGLT 542
            :|:...||||..|...:....|||||:|:.|||||||||.||:.|||||.||:|:|:|:||.|||
Mosquito   349 KAITSMLFGGSRKRMPDGLTRRGDINILLLGDPGTAKSQLLKFVEKVAPIAVYTSGKGSSAAGLT 413

  Fly   543 AYVRRNPVSREWTLEAGALVLADQGVCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTSLQA 607
            |.|.|:|.:|.:.:|.||:||||.||..|||||||.:.||.:||||||||:|||:||||.|:|.:
Mosquito   414 ASVIRDPATRNFIMEGGAMVLADGGVVCIDEFDKMKEDDRVAIHEAMEQQTISIAKAGITTTLNS 478

  Fly   608 RCTVIAAANPIGGRYDPSMTFSENVNLSEPILSRFDVLCVVKDEFDPMQDQQLAKFVVHSHMKHH 672
            ||:|:||||.|.||:|.:.. .||::....||||||::.:||||.|..:|..|||.|:..||...
Mosquito   479 RCSVLAAANSIFGRWDDTKG-DENIDFMPTILSRFDMIFIVKDEHDQQRDITLAKHVMSVHMNAS 542

  Fly   673 PSEEEQPELEEPQLKTVDEIPQDLLRQYIVYAKENIRPKLTNIDEDKIAKMYAQLRQESFATG-- 735
            .:..|..|         .|||..:|::||.|.:.:..|:|.....:|:...|.:||.   ..|  
Mosquito   543 KATAEPKE---------GEIPLAMLKKYIHYCRTHCGPRLNEAAAEKLKSQYVRLRA---GVGEH 595

  Fly   736 --------SLPITVRHIESVIRMSEAHARMHLRENVMEADVSMAIRMMLESFIEA 782
                    |:|||||.:|::||:||:.|:|.|:....||.||.|:|:...|.:.|
Mosquito   596 EKAIDKRLSIPITVRQLEAIIRISESLAKMQLQPFATEAHVSEALRLFAVSTMTA 650

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm2NP_477121.1 MCM2_N 59..166 CDD:403724
MCM_N 182..271 CDD:464206 28/91 (31%)
MCM 276..780 CDD:214631 202/537 (38%)
Mcm5XP_313694.2 MCM_N 32..126 CDD:464206 28/93 (30%)
MCM 129..648 CDD:475121 202/538 (38%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.