DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm2 and LOC1273388

DIOPT Version :10

Sequence 1:NP_477121.1 Gene:Mcm2 / 40973 FlyBaseID:FBgn0014861 Length:887 Species:Drosophila melanogaster
Sequence 2:XP_312356.3 Gene:LOC1273388 / 1273388 VectorBaseID:AGAMI1_009590 Length:834 Species:Anopheles gambiae


Alignment Length:604 Identity:183/604 - (30%)
Similarity:304/604 - (50%) Gaps:105/604 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   291 VRTLGVVTATTGVLPQLSVIK-------YDCVKCGYVLGPFVQSQNTEIK------PGSCPE-CQ 341
            |.::|.:.:..|.:.:....:       :.|.:||       ..|..:.|      |.||.. |:
Mosquito   221 VSSMGKLVSVRGTIIRAGATQIMNTWCAFRCAQCG-------SEQAVQQKDGIYTTPTSCHSGCK 278

  Fly   342 STGPFSINMEQTLYRN---YQKITLQESP--GRIPAGRIPRSKDVILLADLCDQCKPGDELEVTG 401
            :...| :.::|:.:..   ||.:.|||:.  .|..||...::.::.|..:|.|...|||::.|||
Mosquito   279 ARSHF-VLLQQSAFTRMEAYQTLRLQETTQGSRTVAGSAAKNIEIELTHELVDSVCPGDDVTVTG 342

  Fly   402 IY-TNNYDGSLNTDQGFPVFATVIIANHVVVKDSKQVVQS------LTDEDIATIQKLSKDPRIV 459
            |. ..:.|||....:. .:|...:.|  |.|:.:|.|:.:      .|:.|:..|:.:..:|...
Mosquito   343 ILKARSQDGSDGAGKA-SMFKAYLQA--VYVRSNKNVLANWNRLAEFTELDMEAIRLIKAEPSPF 404

  Fly   460 ERVVASMAPSIYGHDYIKRALALALFGGESKNPGEKHKVRGDINLLICGDPGTAKSQFLKYTEKV 524
            ..:|.|:.|:||||:.:|..|.|.||||.:...    :.|.:|::|:.||||..|||.|:....|
Mosquito   405 RLLVQSLCPTIYGHEIVKAGLLLGLFGGMANTA----RTRAEIHVLVVGDPGIGKSQILQSCANV 465

  Fly   525 APRAVFTTGQGASAVGLTAYVR-RNPVSREWTLEAGALVLADQGVCLIDEFDKMNDQDRTSIHEA 588
            :||.:|..|..:|.||||..|| ...|..  :||||||||||||||.|||||||:  ..:.:.|.
Mosquito   466 SPRGIFVCGTNSSNVGLTVTVRTEKGVGA--SLEAGALVLADQGVCCIDEFDKMS--GHSGLLEV 526

  Fly   589 MEQQSISISKAGIVTSLQARCTVIAAANPIGGRYDPSMTFSENVNLSEPILSRFDVLCVVKDEFD 653
            |||:|:|::|||::.::.||.||:|||||.||.|:.:.|.|||:.|...:|||||::.::.|..:
Mosquito   527 MEQRSVSVAKAGVICTVPARTTVLAAANPAGGHYNKAKTVSENLKLHPALLSRFDLVFILLDRSN 591

  Fly   654 PMQDQQLAKFV--VH-------SHMKHHPS-------------EEEQPELEEPQLK-----TVDE 691
            ...|..|...:  ||       ||::..||             ||.:|.||| :|:     .:|.
Mosquito   592 ERTDNLLTAHIQKVHGLAKAGSSHLQPQPSHPFFDASGHCSYEEEGEPPLEE-RLRLAPGEQMDL 655

  Fly   692 IPQDLLRQYIVYAKENIRPKLTNIDEDKIAKMYAQLRQESFATGSLPITVRHIESVIRMSEAHAR 756
            :|.:::::||.||::|::||||....:::.:.:.:||:.......:|:|.|.:|.:||:::|.|:
Mosquito   656 LPPEIVQKYIGYARKNVQPKLTAKAAEELREFFVELRRAHNHMDMIPVTTRQLEGLIRLTQARAK 720

  Fly   757 MHLRENVMEADVSMAIRMMLESFIEAQKFSVMKKMRSTFQKYLSFQKDHSELLFFILRQLTLDQL 821
            :.|......|.|...:.::.:|.::.                  |..|..:|.|           
Mosquito   721 IDLSPEATVAHVRDVLAILRQSMLDV------------------FSTDEGDLQF----------- 756

  Fly   822 AYIRCKDGPGATHVEIMER 840
              .|..:|.|.:...::.:
Mosquito   757 --TRLTNGSGTSKTSMVRK 773

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm2NP_477121.1 MCM2_N 59..166 CDD:403724
MCM_N 182..271 CDD:464206
MCM 276..780 CDD:214631 176/542 (32%)
LOC1273388XP_312356.3 Mcm2 224..832 CDD:440854 182/601 (30%)
Blue background indicates that the domain is not in the aligned region.

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