DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment RpA-70 and AT1G36920

DIOPT Version :9

Sequence 1:	NP_524274.1	Gene:	RpA-70 / 40972	FlyBaseID:	FBgn0010173	Length:	603	Species:	Drosophila melanogaster
Sequence 2:	NP_001319155.1	Gene:	AT1G36920 / 840600	AraportID:	AT1G36920	Length:	177	Species:	Arabidopsis thaliana

Alignment Length:	156	Identity:	30/156 - (19%)
Similarity:	60/156 - (38%)	Gaps:	35/156 - (22%)

- Green bases have known domain annotations that are detailed below.

  Fly    25 LQILAIK--KINSAADSERYRILISDGKYFNSYAMLASQLNVMQHNGELEEFTIVQLDKYVTSLV 87
            |:||.|.  .:....:.::...||.:..:...:.:|.|.:..:.:.|:    ..||..|:.|.
plant    20 LKILGIHLLMLPYGVNLQKMSTLILNLNHQVPFFLLGSLMKTLLYQGK----GTVQSSKFTTK-- 78

  Fly    88 GKDGAGKRVLIISELTVVNPGAEVKSKIGEPVTYENAAKQDLAPKPAVT----SNSKPIAKKEPS 148
                                 |.:.|.:.|.:.::.|...: .|:.|:|    |.|..|:|:...
plant    79 ---------------------AYIHSPLPEILRFQEALCNE-EPRLAITEIKSSKSAHISKQSFH 121

  Fly   149 HNNNNNIVMNSSINSGMT-HPISSLS 173
            .:....|:.....|..|| :.::|:|
plant   122 LSERKTIIELMETNQVMTCNILASIS 147

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
RpA-70	NP_524274.1	rpa1	3..595	CDD:273177	30/156 (19%)
		Rep-A_N	6..107	CDD:281980	13/83 (16%)
		RPA1_DBD_A	168..270	CDD:239920	2/6 (33%)
		RPA1_DBD_B	301..401	CDD:239921
		Rep_fac-A_C	444..589	CDD:285809
AT1G36920	NP_001319155.1	None
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1189265at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010