DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment RpA-70 and AT1G36510

DIOPT Version :9

Sequence 1:	NP_524274.1	Gene:	RpA-70 / 40972	FlyBaseID:	FBgn0010173	Length:	603	Species:	Drosophila melanogaster
Sequence 2:	NP_174868.1	Gene:	AT1G36510 / 840559	AraportID:	AT1G36510	Length:	351	Species:	Arabidopsis thaliana

Alignment Length:	200	Identity:	41/200 - (20%)
Similarity:	66/200 - (33%)	Gaps:	82/200 - (41%)

- Green bases have known domain annotations that are detailed below.

  Fly   154 NIVMNSSINSGMTHPISSLSPYQNKWVIKARVTSKSGIRTWSNARGEGKLF---SMDLMDESGEI 215
            :|:.||.:.      :..::|..:::.||.||     :|.|       :||   .|.|:|..| .
plant     3 SILSNSFVY------LREINPALDQYKIKVRV-----VRLW-------RLFKSIEMVLVDGEG-T 48

  Fly   216 RATAFKEQCDKFYDLIQVDSVYYISKCQLKPANKQYSSLNNAYEMTF-SGETVVQLCEDTDDDPI 279
            |..|..|:                             .|...::..| |||:.:       .|..
plant    49 RVHASIEE-----------------------------GLGKRFQHQFVSGESRI-------IDTF 77

  Fly   280 PEIKYNLVPISDVSGMENKAAVDTIGICKEVGELQSFVAR---TTNKEFKKRDITLVDMSN---- 337
            ..:.|:                |.:|...:||.|.|..|:   |........|:..||..|
plant    78 SFVYYD----------------DVLGQIVDVGSLDSIKAKGKDTVKLSAGSEDLIHVDSENKTSH 126

  Fly   338 SAISL 342
            ||::|
plant   127 SAVTL 131

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
RpA-70	NP_524274.1	rpa1	3..595	CDD:273177	40/199 (20%)
		Rep-A_N	6..107	CDD:281980
		RPA1_DBD_A	168..270	CDD:239920	21/105 (20%)
		RPA1_DBD_B	301..401	CDD:239921	14/48 (29%)
		Rep_fac-A_C	444..589	CDD:285809
AT1G36510	NP_174868.1	RPA1_DBD_A_like	23..>83	CDD:239926	21/108 (19%)
AT1G36510	NP_174868.1	RPA_2b-aaRSs_OBF_like	153..267	CDD:299125
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1599
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1189265at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.910