Protein Alignment RPA1 and RPA70C

DIOPT Version :10

• Sequence 1: NP_524274.1
• Gene: RPA1 / 40972
• FlyBaseID: FBgn0010173
• Length: 603
• Species: Drosophila melanogaster
• Sequence 2: NP_199353.1
• Gene: RPA70C / 834576
• AraportID: AT5G45400
• Length: 853
• Species: Arabidopsis thaliana
• Alignment Length: 759
• Identity: 218/759 - (28%)
• Similarity: 340/759 - (44%)
• Gaps: 176/759 - (23%)

  Fly     5 SLSTGVIARIMHGEVVD----APVLQILAIKKINS-----AADSERYRILISDGKYFNSYAMLAS 60
            ||:.||:.::::|||..    .||||:..:|.|.|     ...|.||:.|:|||... :..||.:
plant     4 SLTEGVVMKMLNGEVTSETDMMPVLQVTELKLIQSKLHQNQESSNRYKFLLSDGTDL-AAGMLNT 67

  Fly    61 QLNVMQHNGELEEFTIVQLDKYVTSLVGKDGAGKRVLIISELTV------------------VNP 107
            .||.:.:.|.::..::::|..|:.:|:    ..:|:::|.:|.|                  :||
plant    68 SLNSLVNQGTIQLGSVIRLTHYICNLI----QTRRIVVIMQLEVIVEKCNIIGNPKEPGHSSINP 128

  Fly   108 ---GAEVKSKIGEPVTYENAAKQDL----------APKPAVTSNSKPIAKKEPSHNNNNNIVMNS 159
               |...:|..|.  ..:.|.:.|:          :|:|.|..||....:...|.|:....|::|
plant   129 QRGGVNTQSNGGS--EQQQARRSDVNGGRYGVSANSPQPQVVHNSSDAGRYCVSANSPQPQVVHS 191

  Fly   160 SINSG------------MTH--------------------------------------------- 167
            |.::|            :.|
plant   192 SSDAGRYGVSANSPQRQVVHNSPDAGRYGQPQVSQRYGTGSGYPETSPSTRPYVSSNAGYGGSRQ 256

  Fly   168 --------------------------------------------PISSLSPYQNKWVIKARVTSK 188
                                                        ||::|:|||.:|.||.|||||
plant   257 DQPRAPTATTAYSRPVQSAYQPQQPPMYVNRGPVARNEAPPRINPIAALNPYQGRWTIKVRVTSK 321

  Fly   189 SGIRTWSNARGEGKLFSMDLMD-ESGEIRATAFKEQCDKFYDLIQVDSVYYISKCQLKPANKQYS 252
            :.:|.::|.||||||||.||:| :.||||.|.|.:..|:|:|.|.|.:||.||:..||||.|.::
plant   322 ADLRRFNNPRGEGKLFSFDLLDADGGEIRVTCFNDAVDQFFDKIVVGNVYLISRGNLKPAQKNFN 386

  Fly   253 SLNNAYEMTFSGETVVQLCEDTDDDPIPEIKYNLVPISDVSGMENKAAVDTIGICKEVGELQSFV 317
            .|.|.||:.....:.:|.||  ||..||...::...|.|:..|||.:..|.|||...:....: :
plant   387 HLPNDYEIHLDSASTIQPCE--DDGTIPRYHFHFRNIGDIENMENNSTTDVIGIVSSISPTVA-I 448

  Fly   318 ARTTNKEFKKRDITLVDMSNSAISLTLWGDDAVNF------------DGHVQPVILVKGTRINEF 370
            .|....|.:||.:.|.|||..::.:|:||    ||            |..|.||:.:|..||.||
plant   449 MRKNLTEVQKRSLQLKDMSGRSVEVTMWG----NFCNAEGQKLQNLCDSGVFPVLALKAGRIGEF 509

  Fly   371 NGGKSLSLGGGSIMKINPDIPEAHKLRGWFDNGGGDSVANMVSARTGGGSFSTEWMTLKDARARN 435
            | ||.:|..|.|...|.||.|||.:||.|::..|.::....:|....|.........:...:...
plant   510 N-GKQVSTIGASQFFIEPDFPEARELRQWYEREGRNAHFTSISREFSGVGRQEVRKVIAQIKDEK 573

  Fly   436 LGSGDKPDYFQCKAVVHIVKQENAFYRACP----QSDCNKKVVDEGNDQFRCEKCNALFPNFKYR 496
            ||:.:|||:....|.:..:|.||..|.|||    ...|:|||.:.|:..:|||||:.......||
plant   574 LGTSEKPDWITVCATISFMKVENFCYTACPIMNGDRPCSKKVTNNGDGTWRCEKCDKCVDECDYR 638

  Fly   497 LLINMSIGDWTSNRWVSSFNEVGEQLLGHTSQEVGEA-LEN-DPAKAEQIFSALNFTSHIFKLRC 559
            .::.:.:.|.|...|.::|.|.||:::|.:::::... .|| |..|.|.|..::.||.:||||:.
plant   639 YILQIQLQDHTDLTWATAFQEAGEEIMGMSAKDLYYVKYENQDEEKFEDIIRSVAFTKYIFKLKI 703

  Fly   560 KNEVYGDMTRNKLTVQSVAPINHKEYNKHLLKELQELTGIGSSN 603
            |.|.|.|..|.|.||.....:|:....:.:|:.:.:|. ||.:|
plant   704 KEETYSDEQRVKATVVKAEKLNYSSNTRFMLEAIDKLK-IGDAN 746

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RPA1	NP_524274.1	rpa1	3..595	CDD:273177	214/749 (29%)
RPA70C	NP_199353.1	rpa1	2..739	CDD:273177	214/749 (29%)