DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment RpA-70 and AT3G30730

DIOPT Version :9

Sequence 1:	NP_524274.1	Gene:	RpA-70 / 40972	FlyBaseID:	FBgn0010173	Length:	603	Species:	Drosophila melanogaster
Sequence 2:	NP_001327684.1	Gene:	AT3G30730 / 822811	AraportID:	AT3G30730	Length:	161	Species:	Arabidopsis thaliana

Alignment Length:	197	Identity:	36/197 - (18%)
Similarity:	62/197 - (31%)	Gaps:	68/197 - (34%)

- Green bases have known domain annotations that are detailed below.

  Fly   144 KKEPSHNNNNNIVMNSSINSGMTHPISSLSPY--QNKWVIKARVTSKSG----IRTWS--NARGE 200
            ||:.||.|.|.....:.         .||.||  ||...|......|..    |..|.  |.:..
plant    22 KKQTSHYNPNMAPHKAQ---------QSLQPYTFQNFDDIDGDFCQKEVLLRLIYIWEARNIKKG 77

  Fly   201 GKLFSMDLM---DESGEIRATAFKEQCDKFYDLIQVDSVYYISKCQLKPANKQYSSLNNAYEMTF 262
            ..|...:|:   .:|..:.......:...:.:.::.:|:|.::|.       ::.:.:||.:..|
plant    78 NILMGFELLFIYSQSNPMEGFISANRIFPYQEDLKYNSIYKLNKV-------EWCNSSNAIKYLF 135

  Fly   263 SGETVVQLCEDTDDDPIPEIKYNLVPISDVSGMENKAAVDTIGICKEVGELQSFVARTTNKEFKK 327
                                ||       |:...||:|:              |:.:.||.....
plant   136 --------------------KY-------VTKGVNKSAI--------------FIEKGTNTTSNS 159

  Fly   328 RD 329
            .|
plant   160 ED 161

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
RpA-70	NP_524274.1	rpa1	3..595	CDD:273177	36/197 (18%)
		Rep-A_N	6..107	CDD:281980
		RPA1_DBD_A	168..270	CDD:239920	20/112 (18%)
		RPA1_DBD_B	301..401	CDD:239921	4/29 (14%)
		Rep_fac-A_C	444..589	CDD:285809
AT3G30730	NP_001327684.1	None
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1189265at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010