DRSC/TRiP Functional Genomics Resources

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Protein Alignment RPA1 and AT3G30430

DIOPT Version :10

Sequence 1:NP_524274.1 Gene:RPA1 / 40972 FlyBaseID:FBgn0010173 Length:603 Species:Drosophila melanogaster
Sequence 2:NP_189663.1 Gene:AT3G30430 / 822752 AraportID:AT3G30430 Length:114 Species:Arabidopsis thaliana


Alignment Length:110 Identity:23/110 - (20%)
Similarity:47/110 - (42%) Gaps:19/110 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   297 NKAAVDTIGICKE--VGELQSFVARTTNKEFKKRDITLVDMSNSAISLTLWGDDAVNFDGHVQPV 359
            |||.:..:.:..:  :||:.:.:.....:::....::..::..||      .|:.|....::.| 
plant     4 NKAEISRLEVLPQDLLGEIVAKIGAKYAEDYHNCILSCKELGASA------NDERVLKTLNLAP- 61

  Fly   360 ILVKGTRINEFNGGKSLSLGGGSIMKINPDIPEAHKLRG--WFDN 402
             |||    ...:..|.|.:....:...|||   ||.::|  |:.|
plant    62 -LVK----KPLSCRKHLLIMKKCLANNNPD---AHYIKGIIWYFN 98

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RPA1NP_524274.1 rpa1 3..595 CDD:273177 23/110 (21%)
AT3G30430NP_189663.1 None

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