Protein Alignment RPA1 and AT2G05642

DIOPT Version :10

• Sequence 1: NP_524274.1
• Gene: RPA1 / 40972
• FlyBaseID: FBgn0010173
• Length: 603
• Species: Drosophila melanogaster
• Sequence 2: NP_850486.2
• Gene: AT2G05642 / 819430
• AraportID: AT2G05642
• Length: 532
• Species: Arabidopsis thaliana
• Alignment Length: 522
• Identity: 91/522 - (17%)
• Similarity: 170/522 - (32%)
• Gaps: 177/522 - (33%)

  Fly   168 PISSLSPYQNKWVIKARVTSKSGIRTWSNARGE--GKLFSMDLM--DESGE-IRATAFKEQCDKF 227
            |:|.|..:.:...:|.|:.     |.|:..:.:  ..:..:||:  |:.|| |:|:...:...||
plant     7 PVSQLHSHLSTCKVKVRIA-----RLWAYHKKDRPKDIMGIDLLLVDDKGERIQASIRSQLLSKF 66

  Fly   228 YDLIQVDSVYYISKCQLKPANKQYSSLNNAYEMTFSGETVVQLCEDTDDDPIPEIKYNLVPISDV 292
            .:.::....|.|...::......|.:.::.|                        |.|.:.::.:
plant    67 QEKLEEGDCYMIMNFEISDNGGSYRASSHPY------------------------KINFMSMTHI 107

  Fly   293 SGMENKAAVDTIGICKEVGELQSFVARTTNKEFKKRDITLVDMSNSAISLTL---WGDDAVNFDG 354
            .||:....|:..|                 ::.|..::.|.|:..|.|.:||   |.:|..::
plant   108 IGMQELKEVNVSG-----------------RQTKLLNLQLRDLGESVIDVTLWEKWAEDLYSY-- 153

  Fly   355 HVQPVILVKGTRINEFNGGKSLSLGGGSIMKINPDIPEAH---KLRG---WFDNGGGDSVANMVS 413
                   |||     :..|..:.:  ||:|||.......:   .:|.   ||          ::.
plant   154 -------VKG-----YKDGSIVLV--GSLMKIKTYFKNVYLTFTIRDSLIWF----------LIF 194

  Fly   414 ARTG---GGSFSTEWM------------------------TLKDARARNLGSGDKPDYF------ 445
            :|..   ..||||:..                        |:....:.:.....||.:.
plant   195 SRQDLCPKSSFSTKLFINSSIAEITEFKESLAKSDCLALTTISTITSSSSSKHSKPSFSLRDQKT 259

  Fly   446 --------QCKAVVHIVKQENA---FYRACPQSDCNKKV----------VDEGNDQFRCEKCNAL 489
                    .|..:..|...:..   ||..|  :.|.|||          ::.|  ::.||||:..
plant   260 IADINSGGACNIIASIFSIDTKVPWFYIGC--NICFKKVSPYFNPETEEIEAG--KYECEKCDTF 320

  Fly   490 FPNFKYRLLINMSIGDWTSNRWVSSFNEVGEQLLGHTSQEVGEALE-----NDPAKAEQ------ 543
            ......|..:.:::.|.|..   :||....:.::....:...|.||     |...|..|
plant   321 VTTTSTRFRVQVTVLDHTGE---ASFLLFDQDVIKLIHKSAYELLEQQVQFNRSDKIPQELLDLE 382

  Fly   544 ----IFSALNFTS---------HIFKLRCKNEVYGDMTRNKLTVQSVAPINHKEYNKHLLKELQE 595
                :|:.....|         .:::|..|.|:......|.|.:.:..|      |.|::.....
plant   383 GRQFVFTIQGSDSTKFSRPSIFRVYELTDKPEIVQKFQENLLQMNTTDP------NTHMVSSFSN 441

  Fly   596 LT 597
            .|
plant   442 ST 443

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RPA1	NP_524274.1	rpa1	3..595	CDD:273177	90/518 (17%)
AT2G05642	NP_850486.2	RPA1_DBD_A_like	19..107	CDD:239926	19/116 (16%)
		RPA1_DBD_B_like	107..225	CDD:239927	30/160 (19%)
		RPA1_DBD_C	258..426	CDD:239922	32/174 (18%)