Protein Alignment RpA-70 and RPA1A

DIOPT Version :9

• Sequence 1: NP_524274.1
• Gene: RpA-70 / 40972
• FlyBaseID: FBgn0010173
• Length: 603
• Species: Drosophila melanogaster
• Sequence 2: NP_178690.1
• Gene: RPA1A / 815209
• AraportID: AT2G06510
• Length: 640
• Species: Arabidopsis thaliana
• Alignment Length: 651
• Identity: 216/651 - (33%)
• Similarity: 335/651 - (51%)
• Gaps: 84/651 - (12%)

  Fly     5 SLSTGVIARIMHGEVVDAPVLQILAIKKINSAAD--SERYRILISDGKYFNSYAMLASQLNVMQH 67
            ||:...|..|..|:|...|:||:|.||.|..:.:  .||||.||||| ....:||:|.|||....
plant     4 SLTPNAITAIHDGDVNLKPLLQVLEIKMIGRSQERSQERYRFLISDG-VSAQHAMVAVQLNDRVK 67

  Fly    68 NGELEEFTIVQLDKYVTSLVGKDGAGKRVLIISELTVVNPGAEVKSKIGEP-------------- 118
            :|:.|:.:||||..|:.|    |..|::::::..:..:...:|.   ||.|
plant    68 SGQFEKGSIVQLIDYICS----DVKGRKLIVVLNMETIVQQSET---IGNPTIFGETDTEAQKTF 125

  Fly   119 ------------------------------VTYENAAKQDLAPKPAVTSNSKPIAKKEPSHNNNN 153
                                          |..:|.|....:.:|:|..:.:|.|    |:.|:.
plant   126 SGTGNIPPPNRVVFNEPMVQHSVNRAPPRGVNIQNQANNTPSFRPSVQPSYQPPA----SYRNHG 186

  Fly   154 NIVMNSSINSGMTHPISSLSPYQNKWVIKARVTSKSGIRTWSNARGEGKLFSMDLMD-ESGEIRA 217
            .|:.|.:  .....||::|:|||.:|.||||||:|..||.::||:|:||:||.||:| :.||||.
plant   187 PIMKNEA--PARVIPIAALNPYQGRWAIKARVTAKGDIRRYNNAKGDGKVFSFDLLDYDGGEIRV 249

  Fly   218 TAFKEQCDKFYDLIQVDSVYYISKCQLKPANKQYSSLNNAYEMTFSGETVVQLCEDTDDDPIPEI 282
            |.|....|:|||:.:|..||.|||..||||.|.::.|.|.:|:.....:.|:||.| :|..||:.
plant   250 TCFNALVDRFYDVTEVGKVYLISKGSLKPAQKNFNHLKNEWEIFLESTSTVELCPD-EDGSIPKQ 313

  Fly   283 KYNLVPISDVSGMENKAAVDTIGICKEVGELQSFVARTTNKEFKKRDITLVDMSNSAISLTLWGD 347
            :::..||||:...||...:|.||:...|..... :.|....|..:|.:.|.|.|..|:.:||||
plant   314 QFSFRPISDIENAENNTILDVIGVVTSVNPSVP-ILRKNGMETHRRILNLKDESGKAVEVTLWG- 376

  Fly   348 DAVNFDGH---------VQPVILVKGTRINEFNGGKSLSLGGGSIMKINPDIPEAHKLRGWFDNG 403
            :..|.||.         ..||:.:|..::::|: |||:.....:.:.||||.|||||||.|||.|
plant   377 EFCNRDGRQLEEMVDSAFHPVLAIKAGKVSDFS-GKSVGTISSTQLFINPDFPEAHKLRTWFDYG 440

  Fly   404 GGDSVANMVSART--GGGSFSTEWMTLKDARARNLGSGDKPDYFQCKAVVHIVKQENAFYRACP- 465
            |.|:.:..:|..|  ||.|.:.....:...:...||..||||:...||.:..:|.::..|.|||
plant   441 GKDTASFSISRDTMPGGVSRNEIRKNVSQIKEEGLGRSDKPDWITVKATISFIKTDSFCYTACPL 505

  Fly   466 ---QSDCNKKVVDEGNDQFRCEKCNALFPNFKYRLLINMSIGDWTSNRWVSSFNEVGEQLLGHTS 527
               ...|||||...|.:::.|::||.......||.|:.:.|.|.|...|:::|.|.||:::|..:
plant   506 MIGDKQCNKKVTRSGTNRWLCDRCNQESDECDYRYLLQVQIQDHTGLTWITAFQETGEEIMGCPA 570

  Fly   528 QEVGEALENDPAKAEQIFSALN---FTSHIFKLRCKNEVYGDMTRNKLTVQSVAPINHKEYNKHL 589
            ::: .|::.:..|.|:....:.   |..::.||:.|.|.|||..|.|:||..|..:|:...:|::
plant   571 KKL-YAMKYELEKEEEFAEIVRDRLFHQYMLKLKIKEESYGDEQRVKMTVVKVDKVNYTSESKYM 634

  Fly   590 L 590
            |
plant   635 L 635

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RpA-70	NP_524274.1	rpa1	3..595	CDD:273177	216/651 (33%)
		Rep-A_N	6..107	CDD:281980	37/102 (36%)
		RPA1_DBD_A	168..270	CDD:239920	51/102 (50%)
		RPA1_DBD_B	301..401	CDD:239921	37/108 (34%)
		Rep_fac-A_C	444..589	CDD:285809	46/151 (30%)
RPA1A	NP_178690.1	rpa1	3..638	CDD:273177	216/651 (33%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	92	1.000	Domainoid score	I2586
eggNOG	1	0.900	-	-		E1_COG1599
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	330	1.000	Inparanoid score	I679
OMA	1	1.010	-	-		QHG54397
OrthoDB	1	1.010	-	-		D1189265at2759
OrthoFinder	1	1.000	-	-		FOG0002228
OrthoInspector	1	1.000	-	-		otm2633
orthoMCL	1	0.900	-	-		OOG6_101316
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X1901
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	12	11.740