Sequence 1: | NP_524274.1 | Gene: | RpA-70 / 40972 | FlyBaseID: | FBgn0010173 | Length: | 603 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006534114.1 | Gene: | Rpa1 / 68275 | MGIID: | 1915525 | Length: | 652 | Species: | Mus musculus |
Alignment Length: | 660 | Identity: | 266/660 - (40%) |
---|---|---|---|
Similarity: | 387/660 - (58%) | Gaps: | 76/660 - (11%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 VLASLSTGVIARIMHGEVVD-APVLQILAIKKINSAADSERYRILISDGKYFNSYAMLASQLNVM 65
Fly 66 QHNGELEEFTIVQLDKYVTSLVGKDGAGK---------------------------RVLIISELT 103
Fly 104 VVNPGAEVKSKIGEPVTY----------ENAAKQDLAPKPAVTSNSKPIAKKEPSHNNNNNIVMN 158
Fly 159 SSI--------------------NSGMTH----PISSLSPYQNKWVIKARVTSKSGIRTWSNARG 199
Fly 200 EGKLFSMDLMDESGEIRATAFKEQCDKFYDLIQVDSVYYISKCQLKPANKQYSSLNNAYEMTFSG 264
Fly 265 ETVVQLCEDTDDDPIPEIKYNLVPISDVSGMENKAAVDTIGICKEVGELQSFVARTTNKEFKKRD 329
Fly 330 ITLVDMSNSAISLTLWGDDAVNFDGHVQPVILVKGTRINEFNGGKSLSLGGGSIMKINPDIPEAH 394
Fly 395 KLRGWFDNGG----GDSVANMVSARTGGGSFSTEWMTLKDARARNLGSGDKPDYFQCKAVVHIVK 455
Fly 456 QENAFYRACPQSDCNKKVVDEGNDQFRCEKCNALFPNFKYRLLINMSIGDWTSNRWVSSFNEVGE 520
Fly 521 QLLGHTSQEVGEALENDPAKAEQIFSALNFTSHIFKLRCKNEVYGDMTRNKLTVQSVAPINHKEY 585
Fly 586 NKHLLKELQE 595 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RpA-70 | NP_524274.1 | rpa1 | 3..595 | CDD:273177 | 266/657 (40%) |
Rep-A_N | 6..107 | CDD:281980 | 35/128 (27%) | ||
RPA1_DBD_A | 168..270 | CDD:239920 | 71/101 (70%) | ||
RPA1_DBD_B | 301..401 | CDD:239921 | 50/99 (51%) | ||
Rep_fac-A_C | 444..589 | CDD:285809 | 61/144 (42%) | ||
Rpa1 | XP_006534114.1 | rpa1 | 2..650 | CDD:273177 | 266/657 (40%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167845926 | |
Domainoid | 1 | 1.000 | 142 | 1.000 | Domainoid score | I4691 |
eggNOG | 1 | 0.900 | - | - | E1_COG1599 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H2208 | |
Inparanoid | 1 | 1.050 | 485 | 1.000 | Inparanoid score | I1422 |
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S1600 |
OMA | 1 | 1.010 | - | - | QHG54397 | |
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0002228 | |
OrthoInspector | 1 | 1.000 | - | - | oto94924 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101316 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR23273 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R2748 |
SonicParanoid | 1 | 1.000 | - | - | X1901 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
17 | 16.740 |