Protein Alignment RPA1 and AT3G31925

DIOPT Version :10

• Sequence 1: NP_524274.1
• Gene: RPA1 / 40972
• FlyBaseID: FBgn0010173
• Length: 603
• Species: Drosophila melanogaster
• Sequence 2: NP_001325790.1
• Gene: AT3G31925 / 28719355
• AraportID: AT3G31925
• Length: 138
• Species: Arabidopsis thaliana
• Alignment Length: 145
• Identity: 30/145 - (20%)
• Similarity: 50/145 - (34%)
• Gaps: 52/145 - (35%)

  Fly   354 GHVQPVILVKGTRI-NEFNGGKSLSLGGGSIMKINPDIPEAHKLRGWFDNGGGDSVANMVSARTG 417
            |.:.|..||...:. |.|:         .|:..||||:|:             |.:.
plant    32 GELNPFYLVGENQFTNAFD---------ASVFVINPDLPK-------------DGLE-------- 66

  Fly   418 GGSFSTEWMTLKDARAR-NLGSGDKPDYFQCKAVVHIVKQENA---FYRACPQSDCNKKV-VDEG 477
                    :|:.:.:.: .|.:      ..||.:..|.|.:..   ||....:  ||||| :::.
plant    67 --------LTIAETKPKLELSA------HICKIMCTIFKIDGDMGWFYVGWKK--CNKKVEMNKN 115

  Fly   478 NDQFRCEKCNALFPN 492
            ||.....|.....|:
plant   116 NDTTIAVKLKKSLPS 130

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RPA1	NP_524274.1	rpa1	3..595	CDD:273177	30/145 (21%)
AT3G31925	NP_001325790.1	Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with oligonucleotide/oligosaccharide (OB) fold.	83..>115	CDD:471953	11/33 (33%)