Protein Alignment RPA1 and AT3G31550

DIOPT Version :10

• Sequence 1: NP_524274.1
• Gene: RPA1 / 40972
• FlyBaseID: FBgn0010173
• Length: 603
• Species: Drosophila melanogaster
• Sequence 2: NP_001326845.1
• Gene: AT3G31550 / 28719353
• AraportID: AT3G31550
• Length: 177
• Species: Arabidopsis thaliana
• Alignment Length: 173
• Identity: 37/173 - (21%)
• Similarity: 62/173 - (35%)
• Gaps: 33/173 - (19%)

  Fly   167 HPISSLSPYQNKWVIKARVTSKSGIRTW-SNARGEGKLFSMDLMDESGEIR---------ATAFK 221
            |.:..::|....|.::.||     :|:: .:.....|:..:.|.||...|.         |...|
plant     5 HDLELINPSIIGWYVRLRV-----VRSFVVHLNALSKIVGLVLADEHNRIEQLLHGVTVDAMIEK 64

  Fly   222 EQCDKFYDLIQVDSVYYISKCQLKPANKQYSSLNNAYEMTFSGETVVQ---------------LC 271
            |..|...:.|.......|.:..:.|.:.......:.:::.|..:|||:               ..
plant    65 EFADYDNEFIDAGDWITIMRFGVYPNSNPVRVTCHKFKICFFKDTVVRKTTVVVANPHYTLTYFS 129

  Fly   272 EDTDDDPIPEIKYNLV-PISDVSGMENKAAVDTIGICKEVGEL 313
            ...||:....:..||| .|.||..:||......|.:|  ||.|
plant   130 SIIDDEIDTSVLINLVGAIHDVGEVENTRRTQNIQLC--VGML 170

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RPA1	NP_524274.1	rpa1	3..595	CDD:273177	37/173 (21%)
AT3G31550	NP_001326845.1	DUF223	39..141	CDD:145722	17/101 (17%)