Sequence 1: | NP_524274.1 | Gene: | RpA-70 / 40972 | FlyBaseID: | FBgn0010173 | Length: | 603 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001157032.1 | Gene: | MEIOB / 254528 | HGNCID: | 28569 | Length: | 471 | Species: | Homo sapiens |
Alignment Length: | 389 | Identity: | 82/389 - (21%) |
---|---|---|---|
Similarity: | 154/389 - (39%) | Gaps: | 57/389 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 186 TSKSGIRTWSNARGEGKLFSMDLMDESGE-IRATAF------KEQCDKFY--DLIQVDSVYYISK 241
Fly 242 CQLKPANK-QYSSLNNAYEMTFSGETVVQLCEDTDDD---------PIPEIK--YNLVPISDVSG 294
Fly 295 MENKAAVDTIGICKEVGELQSFVARTTNKEFKKRDITLVDMSNSAISLTLWGDDAVNFDGHVQP- 358
Fly 359 --VILVKGTRIN--EFNGGKSLSLGGGSIMKINPDIPEAHKLRGWFDNGGGDSVAN--------- 410
Fly 411 MVSARTGGGSFSTEWMTLKDARARNLGSGDKPDYFQCKAVVHIVKQENAFYRA----CPQSDCNK 471
Fly 472 KVVDEGNDQFRCEKCNALFPNFK-----YRLLINMSIGDWTSNRWVSSF-NEVGEQLLGHTSQE 529 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RpA-70 | NP_524274.1 | rpa1 | 3..595 | CDD:273177 | 82/389 (21%) |
Rep-A_N | 6..107 | CDD:281980 | |||
RPA1_DBD_A | 168..270 | CDD:239920 | 16/93 (17%) | ||
RPA1_DBD_B | 301..401 | CDD:239921 | 26/104 (25%) | ||
Rep_fac-A_C | 444..589 | CDD:285809 | 23/96 (24%) | ||
MEIOB | NP_001157032.1 | RPA1_DBD_B | 167..270 | CDD:239921 | 26/103 (25%) |
RPA_2b-aaRSs_OBF_like | <345..>421 | CDD:299125 | 21/72 (29%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |