| Sequence 1: | NP_524274.1 | Gene: | RpA-70 / 40972 | FlyBaseID: | FBgn0010173 | Length: | 603 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_495606.1 | Gene: | rpa-1 / 174238 | WormBaseID: | WBGene00017546 | Length: | 655 | Species: | Caenorhabditis elegans |
| Alignment Length: | 646 | Identity: | 173/646 - (26%) |
|---|---|---|---|
| Similarity: | 310/646 - (47%) | Gaps: | 68/646 - (10%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 6 LSTGVIARIM--HGEVVDAPVLQIL--AIKKINSAADSERYRILISDGKYFNSYAMLASQLN--V 64
Fly 65 MQHNGELEEFTIVQLDKYVTSLVGKDGA-------GKRVLIISELTVVNPGAEVKSKIGEPVTYE 122
Fly 123 ----NAAKQDLAPKPA------VTSNSKPIAKKEPSHNNNNNIVMN------------------- 158
Fly 159 --SSINSGMTHPISSLSPYQNKWVIKARVTSKSGIRTWSNARGEGKLFSMDLMDESGE-IRATAF 220
Fly 221 KEQCDKFYDLIQVDSVYYISKCQLKPANKQYSSLNNAYEMTFSGETVVQLCEDTDDDPIPEIKYN 285
Fly 286 LVPISDVSGMENKAAVDTIGICKEVG-ELQSFVARTTNKEFKKRDITLVDMSNSAISLTLWGDDA 349
Fly 350 VN--FDGHVQPVILVKGTRINEFNGGKSLSLGGGSIMKI--NPDIPEAHKLRGWFDNGGGDSVAN 410
Fly 411 MVSARTGGGSFSTEWMTLKDARARNLG-SGDKPDYFQCKAVVHIVKQENAFYRACPQSDCNKKVV 474
Fly 475 DEGNDQFRCEKCNALFPNFKYRLLINMSIGDWTSNRWVSSFNEVGEQLLGHTSQEVGEALENDPA 539
Fly 540 KAEQIFSALNFTSHIFKLRCKNEVYGDMTRNKLTVQSVAPINHKEY---NKHLLKELQELT 597 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| RpA-70 | NP_524274.1 | rpa1 | 3..595 | CDD:273177 | 172/642 (27%) |
| Rep-A_N | 6..107 | CDD:281980 | 25/113 (22%) | ||
| RPA1_DBD_A | 168..270 | CDD:239920 | 33/102 (32%) | ||
| RPA1_DBD_B | 301..401 | CDD:239921 | 38/104 (37%) | ||
| Rep_fac-A_C | 444..589 | CDD:285809 | 49/147 (33%) | ||
| rpa-1 | NP_495606.1 | rpa1 | 12..648 | CDD:273177 | 172/639 (27%) |
| RPA1_DBD_A | 225..325 | CDD:239920 | 33/101 (33%) | ||
| RPA1_DBD_B | 353..455 | CDD:239921 | 37/104 (36%) | ||
| Rep_fac-A_C | 498..642 | CDD:285809 | 48/144 (33%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C160164050 | |
| Domainoid | 1 | 1.000 | 100 | 1.000 | Domainoid score | I4403 |
| eggNOG | 1 | 0.900 | - | - | E1_COG1599 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 216 | 1.000 | Inparanoid score | I2323 |
| Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S1600 |
| OMA | 1 | 1.010 | - | - | QHG54397 | |
| OrthoDB | 1 | 1.010 | - | - | D1189265at2759 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0002228 | |
| OrthoInspector | 1 | 1.000 | - | - | oto17871 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_101316 | |
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R2748 |
| SonicParanoid | 1 | 1.000 | - | - | X1901 | |
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 1 | 0.960 | - | - | ||
| 15 | 14.650 | |||||