DRSC/TRiP Functional Genomics Resources

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Protein Alignment DNApol-iota and REV1

DIOPT Version :9

Sequence 1:NP_001287227.1 Gene:DNApol-iota / 40965 FlyBaseID:FBgn0037554 Length:737 Species:Drosophila melanogaster
Sequence 2:NP_014991.1 Gene:REV1 / 854527 SGDID:S000005873 Length:985 Species:Saccharomyces cerevisiae


Alignment Length:507 Identity:104/507 - (20%)
Similarity:196/507 - (38%) Gaps:154/507 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 IIHLDMDYFYAQVEEI------------RDPTLRSKALGIQQKNIVVTCNYVARAKGVTKLMLIA 69
            |.|:|.|.|:|.|..:            |||.:  ...|.:..:| .:||||||:.|:...|.::
Yeast   358 IFHIDFDCFFATVAYLCRSSSFSACDFKRDPIV--VCHGTKNSDI-ASCNYVARSYGIKNGMWVS 419

  Fly    70 EAQRICPDLVLVNGEDLAPYRQMSQRIFDLLLNYTPLVEKLGFDENFMDVTALVE-LRQAHVAEA 133
            :|:::.|     ||..|            :.|.||       |::..:...|... |::.::...
Yeast   420 QAEKMLP-----NGIKL------------ISLPYT-------FEQFQLKSEAFYSTLKRLNIFNL 460

  Fly   134 LLRPPVGHTYPADGTPLSNCDCGCAQRL--------AIGTRIAQEIREEL-KLRLGITCCAGIAY 189
            :|             |:|..:..|.:.:        .:..|:.:|||:|: :...|.|...|.:.
Yeast   461 IL-------------PISIDEAVCVRIIPDNIHNTNTLNARLCEEIRQEIFQGTNGCTVSIGCSD 512

  Fly   190 NKLLAKLVGSSHEPNQQTV-LVSTYAEQFMR--ELGDLKRVTGIGQKTQCLLLEAGMSSVEQL-- 249
            :.:||:|.....:||...: ..|..:|:|..  :|.||   .|:|..| ...||:...|...|  
Yeast   513 SLVLARLALKMAKPNGYNITFKSNLSEEFWSSFKLDDL---PGVGHST-LSRLESTFDSPHSLND 573

  Fly   250 --QQCDMDVMRKKFGFETATRLRDLAFGR-DTSLVRPSGKPKTIGMEDACKPISVRTDVEERFR- 310
              ::..:|.::...|.:...::.....|: |...::....||.:...   |.:|:..:...||: 
Yeast   574 LRKRYTLDALKASVGSKLGMKIHLALQGQDDEESLKILYDPKEVLQR---KSLSIDINWGIRFKN 635

  Fly   311 -----MLLKR----LVEQVAEDGRV--PIAIKVVLR---------------KFDSQKKSSHR--E 347
                 :.::|    |:|::.|..:.  .|.:|::.|               :.||..:||..  .
Yeast   636 ITQVDLFIERGCQYLLEKLNEINKTTSQITLKLMRRCKDAPIEPPKYMGMGRCDSFSRSSRLGIP 700

  Fly   348 TKQANI----LPSLFKTSMCPGETGVSKVQLADGAQDKLLKIVMRLFERIVDMSK---------P 399
            |.:..|    :.||::|..||               ...|:.:...|.::||:..         |
Yeast   701 TNEFGIIATEMKSLYRTLGCP---------------PMELRGLALQFNKLVDVGPDNNQLKLRLP 750

  Fly   400 FNITLLGLAF------------SKFQERKVGSSSIANFLIKKADLEVQSITS 439
            |...:...||            ::|::|        |:..|::.|...|::|
Yeast   751 FKTIVTNRAFEALPEDVKNDINNEFEKR--------NYKRKESGLTSNSLSS 794

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DNApol-iotaNP_001287227.1 PolY_Pol_iota 18..411 CDD:176457 96/476 (20%)
REV1NP_014991.1 BRCT_Rev1 165..249 CDD:349351
PolY_Rev1 315..735 CDD:176455 91/438 (21%)
Rev1_C 875..981 CDD:213388
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0389
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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