DRSC/TRiP Functional Genomics Resources

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Protein Alignment DNApol-iota and POLH

DIOPT Version :9

Sequence 1:NP_001287227.1 Gene:DNApol-iota / 40965 FlyBaseID:FBgn0037554 Length:737 Species:Drosophila melanogaster
Sequence 2:NP_006493.1 Gene:POLH / 5429 HGNCID:9181 Length:713 Species:Homo sapiens


Alignment Length:572 Identity:134/572 - (23%)
Similarity:250/572 - (43%) Gaps:102/572 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 RTIIHLDMDYFYAQVEEIRDPTLRSKALGIQQKNI-----VVTCNYVARAKGVTKLMLIAEAQRI 74
            |.:..:|||.|:.|||:.::|.||:|...:.|...     ::..:|.|||.|||:.|...:|:::
Human     7 RVVALVDMDCFFVQVEQRQNPHLRNKPCAVVQYKSWKGGGIIAVSYEARAFGVTRSMWADDAKKL 71

  Fly    75 CPDLVLVNGED------LAPYRQMSQRIFDLLLNYTPLVEKLGFDENFMDVTALVELR----QAH 129
            ||||:|....:      |..||:.|..:.:::..:. ::|:...||.::|:|:.|:.|    |..
Human    72 CPDLLLAQVRESRGKANLTKYREASVEVMEIMSRFA-VIERASIDEAYVDLTSAVQERLQKLQGQ 135

  Fly   130 VAEALLRP-------PVGHTYP-----------------ADGTPLSNCDCGCAQRLAIGTRIAQE 170
            ...|.|.|       |.|.|..                 .|...:.|......| |.:|..|.:|
Human   136 PISADLLPSTYIEGLPQGPTTAEETVQKEGMRKQGLFQWLDSLQIDNLTSPDLQ-LTVGAVIVEE 199

  Fly   171 IREELKLRLGITCCAGIAYNKLLAKLVGSSHEPNQQTVLVSTYAEQFMRELGDLKRVTGIGQKTQ 235
            :|..::...|..|.|||::||:||||....::||:||::......|...:: .::::..:|.|..
Human   200 MRAAIERETGFQCSAGISHNKVLAKLACGLNKPNRQTLVSHGSVPQLFSQM-PIRKIRSLGGKLG 263

  Fly   236 CLLLE-AGMSSVEQLQQCDMDVMRKKFGFETATRLRDLAFGRDTSLVRPSGKPKTIGMEDACK-- 297
            ..::| .|:..:.:|.|.....::..||.:..:.|..:..|.:...|:|...|||||    |.  
Human   264 ASVIEILGIEYMGELTQFTESQLQSHFGEKNGSWLYAMCRGIEHDPVKPRQLPKTIG----CSKN 324

  Fly   298 -----PISVRTDVEERFRMLLKRLVEQVAED--------GRVPIAIKV-------------VLRK 336
                 .::.|..|:.....|.:.|.|::.:|        .::.::|:|             .|.:
Human   325 FPGKTALATREQVQWWLLQLAQELEERLTKDRNDNDRVATQLVVSIRVQGDKRLSSLRRCCALTR 389

  Fly   337 FDSQKKSSHRETKQANILPSLFKTSMCPGET--GVSKVQLADGAQDKLLKIVMRLFERIVDMSKP 399
            :|:.|.|....|...|...|..:|...|..|  .:...:.:..|......|...|      .|.|
Human   390 YDAHKMSHDAFTVIKNCNTSGIQTEWSPPLTMLFLCATKFSASAPSSSTDITSFL------SSDP 448

  Fly   400 FNITLLGLAFSKFQER---------KVGSSSIANFLIKKADLEVQSITSLTNTSLTSPT----AE 451
            .::..:.:..|:.:.:         |..::|:.:|..|.|  |.|.:...:.:|||:||    :.
Human   449 SSLPKVPVTSSEAKTQGSGPAVTATKKATTSLESFFQKAA--ERQKVKEASLSSLTAPTQAPMSN 511

  Fly   452 SPTSDECAFRSSPTTFKPSDQFYRRRATTASPVPMLLDNGSESAATNSDFSD 503
            ||:.....|::|.:|  .::.|:::::....  ...|:|.|.|:...:.:|:
Human   512 SPSKPSLPFQTSQST--GTEPFFKQKSLLLK--QKQLNNSSVSSPQQNPWSN 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DNApol-iotaNP_001287227.1 PolY_Pol_iota 18..411 CDD:176457 109/462 (24%)
POLHNP_006493.1 DinP 7..>354 CDD:223466 92/353 (26%)
PolY_Pol_eta 10..428 CDD:176456 104/424 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 441..472 4/36 (11%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 495..527 10/33 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 677..705
PIP-box. /evidence=ECO:0000269|PubMed:15149598, ECO:0000269|PubMed:16357261 701..708
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0389
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1593931at2759
OrthoFinder 1 1.000 - - FOG0001835
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4551
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
54.850

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