DRSC/TRiP Functional Genomics Resources

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Protein Alignment DNApol-iota and Poli

DIOPT Version :9

Sequence 1:NP_001287227.1 Gene:DNApol-iota / 40965 FlyBaseID:FBgn0037554 Length:737 Species:Drosophila melanogaster
Sequence 2:NP_036102.2 Gene:Poli / 26447 MGIID:1347081 Length:737 Species:Mus musculus


Alignment Length:787 Identity:245/787 - (31%)
Similarity:365/787 - (46%) Gaps:157/787 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ASVLGKSEA-----------HQRTIIHLDMDYFYAQVEEIRDPTLRSKALGIQQKNIVVTCNYVA 57
            |...|.|.|           ..|.|:|:|:|.||||||.|.:|.|:.:.||:|||.:||||||.|
Mouse    26 AGAAGSSRAVCSQGPPTQISSSRVIVHVDLDCFYAQVEMISNPELKDRPLGVQQKYLVVTCNYEA 90

  Fly    58 RAKGVTKLMLIAEAQRICPDLVLVNGEDLAPYRQMSQRIFDLLLNYTPLVEKLGFDENFMDVTAL 122
            |..||.|||.:.:|:..||.|||||||||:.||:||.::.:||..::|.||:|||||||:|:|.:
Mouse    91 RKLGVRKLMNVRDAKEKCPQLVLVNGEDLSRYREMSYKVTELLEEFSPAVERLGFDENFVDLTEM 155

  Fly   123 VE--LRQAHVAEALLRPPVGHTYPADGTPLSNCDCGCAQRLAIGTRIAQEIREELKLRLGITCCA 185
            ||  |:|....|.......||.|......|.|.   ..:||.:|::||.|:||.:..:||:|.||
Mouse   156 VEKRLQQLPSEEVPSVTVFGHVYNNQSVNLHNI---MHRRLVVGSQIAAEMREAMYNQLGLTGCA 217

  Fly   186 GIAYNKLLAKLVGSSHEPNQQTVLVSTYAEQFMRELGDLKRVTGIGQKTQCLLLEAGMSSVEQLQ 250
            |:|.||||||||....:|||||||:....:..:..|..:|.:.|||.||...|...|::||..||
Mouse   218 GVAPNKLLAKLVSGVFKPNQQTVLLPESCQHLIHSLNHIKEIPGIGYKTAKRLEVLGINSVHDLQ 282

  Fly   251 QCDMDVMRKKFGFETATRLRDLAFGRDTSLVRPSGKPKTIGMEDACKPISVRTDVEERFRMLLKR 315
            ...:..:.|:.|...|.|::.|:||.|.|.|.|||.|::...||..|..|...:.:.:...||..
Mouse   283 TFPIKTLEKELGIAIAQRIQQLSFGEDKSPVTPSGPPQSFSEEDTFKKCSSEVEAKAKIEELLSS 347

  Fly   316 LVEQVAEDGRVPIAIKVVLRKFDSQKKSSHRETKQANILPSLFKTSMCPGETGVSKVQLADGAQD 380
            |:.:|.:|||.|..:::|:|::..  |..:||::|            ||..:.|.: :|..|..|
Mouse   348 LLTRVCQDGRKPHTVRLVIRRYSD--KHCNRESRQ------------CPIPSHVIQ-KLGTGNHD 397

  Fly   381 K---LLKIVMRLFERIVDMSKPFNITLLGLAFSKFQERKVGSSSIANFLIKKADLEVQSITSLTN 442
            .   |:.|:|:||..:|::..||::||:.:.|...   |..||:      ||..::.. :|||:.
Mouse   398 SMPPLIDILMKLFRNMVNVKMPFHLTLMSVCFCNL---KALSSA------KKGPMDCY-LTSLST 452

  Fly   443 TSLTSPTA----ESPTSD---------EC----AFRSSPTTFKPSDQ--FYRRRATTASPVPMLL 488
            .:.|...|    ::.|.|         :|    ...|:.|...|.|.  |.:.:.|:..|:..|.
Mouse   453 PAYTDKRAFKVKDTHTEDSHKEKEANWDCLPSRRIESTGTGESPLDATCFPKEKDTSDLPLQALP 517

  Fly   489 D-----------------------------NGSESA---ATNSDFSDFSETEVEPSPKKSRIGRL 521
            :                             .||.|.   |:....|.||..:::.|....| ...
Mouse   518 EGVDQEVFKQLPADIQEEILSGKSRENLKGKGSLSCPLHASRGVLSFFSTKQMQASRLSPR-DTA 581

  Fly   522 LVSKRSRLAADV-----GDSAAEVASPSKLRVCDLRLNSRDSEKDFPMSTTPSTSTSAPAPRFRT 581
            |.|||...|:..     |.|....:.||..:.|...::|:  .||...|..|:.|...   :|.:
Mouse   582 LPSKRVSAASPCEPGTSGLSPGSTSHPSCGKDCSYYIDSQ--LKDEQTSQGPTESQGC---QFSS 641

  Fly   582 VQP--------PNTLLQRIDGSLRFVTTRTASRLSSNASSTASSPLPSPMDDSIAMSAPSTTTLP 638
            ..|        ||...:::..:.|.|.:...:..:|:....:...|.|...||      :...||
Mouse   642 TNPAVSGFHSFPNLQTEQLFSTHRTVDSHKQTATASHQGLESHQGLESRELDS------AEEKLP 700

  Fly   639 FPSPTTTAVVTSSSSTATCDALTNIVCPAGVDAEVFKELPVELQTELIASWRSSLVAAVEQTNGT 703
            |                          |..:|.:||.|||.|:|.||:|.|..:           
Mouse   701 F--------------------------PPDIDPQVFYELPEEVQKELMAEWERA----------- 728

  Fly   704 GAATSAA 710
            |||..:|
Mouse   729 GAARPSA 735

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DNApol-iotaNP_001287227.1 PolY_Pol_iota 18..411 CDD:176457 162/397 (41%)
PoliNP_036102.2 PolY_Pol_iota 51..431 CDD:176457 162/397 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849657
Domainoid 1 1.000 170 1.000 Domainoid score I3779
eggNOG 1 0.900 - - E1_COG0389
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 293 1.000 Inparanoid score I2748
Isobase 1 0.950 - 0 Normalized mean entropy S5319
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1593931at2759
OrthoFinder 1 1.000 - - FOG0001835
OrthoInspector 1 1.000 - - oto92696
orthoMCL 1 0.900 - - OOG6_106220
Panther 1 1.100 - - LDO PTHR46404
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4551
SonicParanoid 1 1.000 - - X5102
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.740

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